| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1177 |
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| Symbol | |
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| ID | 5774555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1075014 |
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| End bp | 1076786 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641316820 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_001582511 |
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| Protein GI | 161528685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAT ACCAGTTAGG AATGTGGAAT CTTTCAGAAT TAGCAAAAAA TCCAAAAAGT
TCAGCATTTC AAAAACAGAT CAAAGAATTA GAAAATCAGG CTGAAAAATT TGAGAAAATT
AAATCAAAAC TGGACCCAAA AATGTCATCA AAGAAATTCA TGGAAATACT TAGTCAAGTA
GAAGAAATTT CTGAGAAAAT GAGTAAAATT GGTGGATATG CATCTCTTTC ATATTCTTCA
GATACACAAT CAGATGAAGC AACATCATTA ATGACTAGAA TGTCAAAATT AGGATCAGAC
ATTTCAAACA AAATATTGTT TTTTGATTTA TGGTGGAAAA CGCAAGTTGA TGAAAAAAAT
GCAAAGAGAT TGATTAAAGA TGCAGGAGAA CTCTCAGAAT ATCTAGCACA CAAAAGACTA
ATTGCAAAAT ACTCACTCAG TGAACCTGAA GAGAGAATCA TTAACACATT AGATGTTACA
GGTATTTCTG CACTTGTAAA ATTGTATGAC AAGATAACTA ATGCATTTGA ATACCAAATG
AAAATCGGAA ACAAAACAAA AAAGATGACA AGAGAAGAAT TAACAAATTA TGTTCGACAT
ACAAATCCAA AAATTCGTGA AACAGCTTAC AAAACAATCC TAGGAAAATA TAATGAAAAC
AAAGGTGTTG TTGGAGAAAT TTATCAAAAT ATTGCACTTA ATTGGAAAGA TGAAGGAATC
GATATTCGAG GCTACAGAAC GCCAATTTCT ATGAGGAATA TTGGAAATGA TGTAGATGAC
AAAACAATAG AATCACTACT TCTAGTTTGC AAAAAAAATG CTCCAGTCTT TCAAAAATTC
TTTGTGCAAA AAGCAAAGAT GCTCAAAATG AAAAAGCTTA GAAGATATGA CATCTATGCA
CCTGCTGCTG CAAACATTAA AGAAAAAAAT TATTCATACA ACAAATCTGT AAAACTAGTT
TTTGAATCAC TAGGCAAATT TAGTAACACA TTAGAAGATT TTGCAAGAAA GGTTTTCAAT
GAAAATCATA TTGACTCAGA AGTAAGACAA GGAAAAAGAG ATGGAGCATT TTGTAGTACA
TTAACACCCA AAATCACGCC TTATGTATTG GTCAATTTTA CAGGAAAATC AAGAGACGTA
TTTACATTAG CTCATGAGTT AGGTCACGCG GTCCACAGTC AAGCTGCACA AGATAGATCA
ATTCTAGTCC AAGATGCACC ATTACCATTA GCTGAAACAG CATCAACATT TTCTGAATTA
CTGCTTTATG ACAATATTTC AGACAAGATT TCAGATGATG AAAAGAAAAT AATGTTATCT
GAAAAAATTG ATGATTTGTA TGCAACAATT CTAAGACAAT CATTTTTTAC AATTTTTGAG
ATTGATGCTC ATAAACAAAT TGGCGAAGGA ACAACCATAG ATGAAATTTC AAAAACATAT
TTACAAAATC TCAAACAACA ATTTGGAAAA TCAGTTGATG TTACAGATGA CTTTGCAATA
GAATGGAGTT GTATCCCACA TTTCTATCAC ACACCATTTT ATTGCTATGC ATATTCATTT
GGAAATCTTC TTGCATTATC ATTATTCCAA AGATACAAAA AAGAAGGTAA AGACTTTGTT
CCAGCATACA TTGACATTCT TGCAGCAGGG GGTTCAAAAA AACCTGAAAA ACTCCTTAAA
GAACATGGAT TAGATATACA ATCTACCAAG TTTTGGCAAG AAGGTTTTGA TTATGTTAAC
GGACAGGTAA AAGCACTATC ATCACTAAAC TAG
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| Protein sequence | MSQYQLGMWN LSELAKNPKS SAFQKQIKEL ENQAEKFEKI KSKLDPKMSS KKFMEILSQV
EEISEKMSKI GGYASLSYSS DTQSDEATSL MTRMSKLGSD ISNKILFFDL WWKTQVDEKN
AKRLIKDAGE LSEYLAHKRL IAKYSLSEPE ERIINTLDVT GISALVKLYD KITNAFEYQM
KIGNKTKKMT REELTNYVRH TNPKIRETAY KTILGKYNEN KGVVGEIYQN IALNWKDEGI
DIRGYRTPIS MRNIGNDVDD KTIESLLLVC KKNAPVFQKF FVQKAKMLKM KKLRRYDIYA
PAAANIKEKN YSYNKSVKLV FESLGKFSNT LEDFARKVFN ENHIDSEVRQ GKRDGAFCST
LTPKITPYVL VNFTGKSRDV FTLAHELGHA VHSQAAQDRS ILVQDAPLPL AETASTFSEL
LLYDNISDKI SDDEKKIMLS EKIDDLYATI LRQSFFTIFE IDAHKQIGEG TTIDEISKTY
LQNLKQQFGK SVDVTDDFAI EWSCIPHFYH TPFYCYAYSF GNLLALSLFQ RYKKEGKDFV
PAYIDILAAG GSKKPEKLLK EHGLDIQSTK FWQEGFDYVN GQVKALSSLN
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