Gene Nmar_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1161 
Symbol 
ID5772936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1062348 
End bp1063718 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content36% 
IMG OID641316804 
Producthypothetical protein 
Protein accessionYP_001582495 
Protein GI161528669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA AAGATATCAA GAAAATTATG TATAGCCATG ATTACCATGA ATTCCATGAA 
TATTCATATA CTAGTACACG CTCCACACCA TGCTTGCATC TGACGTATCT TGTATTGGCA
TTTGCTCTGA TAATCCCGTC TTTTGCATAT GCCCAAGAAT CTGGTGATTT TCCAAACTGG
TATACAGAAT TTGTAATCAT GTGGACGGAA AGACAAATTG CAGATGATGA ATTTATCTTG
TCAACAGAAT ATCTAGCAAA CCAAAATTTG ATTTCAGTGC CATTGTTTGA TCCTACAAGT
CCGTCCGCCG GAATTCCTGA TTGGATAAAA AATACTGCAG ACTGGTGGAC AGACGGCATT
GTGTCTGATT CCGAGTTTCT TTCAAGCTTG GAATTTTTGG TTGATACAAA TGTAATTAAA
AAAACATCGT ACCAATCTGA TTCTCTGTTT GATAATTTTA CAATTGATGT TGAGAAATTA
GAAAACGGTG AGAAAGTTAC ATGGACATCA AAGGATAGTT TGTCCCATAC AATAACAAGC
GGTACTCCTG CAAAACACAC ACCGTTGTTT TCTTCTGGAA TTATTCACAA GGGAGAATCC
GTATCCTATG TTCTTGAGAA TGGTGTCTAT TCTTTTTTCT GCATGATACA TCCCTGGGAA
ACAGAAACTC TTACTGTACC TGTTGCATTG GAGAATTATC AAACGGCAGA ATCTGATTTT
CCTGATTCCA AAACAGAAGA AACAACTTTA GAACAAAAAC AAGAAGAACA CAAAACGCTG
CAAGAAAAAC AAGCAAAGAA AATTCTTGCA AATTTTGGCA GCACGTCATT GAACATTGTA
TCTGTTTCCA ACTCTGACGG GCAATTACAC TTGGAATACA TGGAGGAATT TTTCACCAGA
CACATAGATC AATTCAATCC TCAAATTGTA GAGAACATAA AATTAATGGA AAACGATCCT
GAAAAATATC TTGATTTGGC TTTGGCTGAT GCAGGACTGT CTCGGGAATT TTATTCTGGG
CAGATTTCAA TATGGGGTGA AATTTTCAAG GTAAAATCTG AGAACCTTGA TCAACAACAT
GTTCGTTCTT TGGAGGAAAT GCAGTCTTTG GATTTGGAGG ATTCCAAAAA AGAATACTAT
GTTGCAGAAA TAAACAAGGC TAAGCAGACA TTTGATGACA TGTTAGAGTC CTCCGGCCTA
ACCATGATTC AGCCACTTGA GGAAAAAATT ACAAAATCTG AACATTCTGA CTCTTCTAAA
GGTAAGATCC TTGAATCAAA TTTGTCAGAA AATGACCATA TTGGCAGAAT AATTGCAACA
ATTTCTGATT TTATTACGTC CTTGTTATAT GGAATCAAAT CTTTGTTCTA A
 
Protein sequence
MKIKDIKKIM YSHDYHEFHE YSYTSTRSTP CLHLTYLVLA FALIIPSFAY AQESGDFPNW 
YTEFVIMWTE RQIADDEFIL STEYLANQNL ISVPLFDPTS PSAGIPDWIK NTADWWTDGI
VSDSEFLSSL EFLVDTNVIK KTSYQSDSLF DNFTIDVEKL ENGEKVTWTS KDSLSHTITS
GTPAKHTPLF SSGIIHKGES VSYVLENGVY SFFCMIHPWE TETLTVPVAL ENYQTAESDF
PDSKTEETTL EQKQEEHKTL QEKQAKKILA NFGSTSLNIV SVSNSDGQLH LEYMEEFFTR
HIDQFNPQIV ENIKLMENDP EKYLDLALAD AGLSREFYSG QISIWGEIFK VKSENLDQQH
VRSLEEMQSL DLEDSKKEYY VAEINKAKQT FDDMLESSGL TMIQPLEEKI TKSEHSDSSK
GKILESNLSE NDHIGRIIAT ISDFITSLLY GIKSLF