Gene Nmar_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1146 
Symbol 
ID5773096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1048465 
End bp1049589 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content38% 
IMG OID641316789 
Product2-alkenal reductase 
Protein accessionYP_001582480 
Protein GI161528654 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0282763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTAGAA ATAATTCAAA AATTTTGCTT GGAGGAGTAG TCTTTAGCGT TGTTTTGATG 
TTGGGGCTGT CTGTTGCGTT TCTGTCACCT GTACTTGCAC AAGACAATTC CTACTCCTCT
GAGAATCTTC AATCTAATGT TGAATCCTCT TCTGACCTTT CACTTGTTGA AATATTTGAA
CGCTCAGAAT TTGGTGTAGT AAGTATTGCA GTTACAAAAA CATCCCCTCA TGGAGATGCT
AGTGGTGTTG GCTCTGGATT TATTTTTGAC AAGGAGGGTC ACATCATAAC AAACAATCAT
GTGGTAAGGG ATAGTAAGAA AATTGATGTA ACTTTTACTG ACGGAACATC TTATCGTGCA
AAAGTTGTAG GAACTGATCC TTATGCAGAT ATCGCAGTAC TCAAAATTGA TGTAAATTCT
GAAAAACTTT ACCCTCTACC AATAGGTGAT TCCTCTAATC TCAAAGTAGG AGAGCAAATA
ACTGCAATAG GTAATCCCTT TGGATTGTCA GGCTCTATGA CTTCTGGAAT TGTGAGTCAA
TTAGGACGAT TGTTGCCTAC AGGTGTTGGA TTTTCCATTC CTGATGTAAT CCAGACAGAT
ACTGCAATCA ATCCAGGAAA TTCGGGAGGA CCACTATTGA ATATGAAAGG CGAAGTAGTT
GGGGTAAACA CTGCAATTTA TTCAAGTGAT GGTAGCTTTT CAGGTGTTGG ATTTTCAATT
CCATCAAATG TTATTTTAAA AATTGTCCCT GTTTTGATTA CGGATGGGGA ATTTCATCAT
CCTTGGGTTG GAATTTCTAG TGCAAACATT ACCCCTGATC TTGCAGAACT ATTGAATCTC
GAAGATGCAA AAGGTGTTTT AGTTATGACA GTTGTAAAAG ACAGTCCTGC CAATAAAGCA
GGCCTTAGAG GCTCATCTGA AACTGCAGTG TATGATGAAA TTGAGTATAC TATAGGTGGA
GATATTATTT TATCCATTGA TGGAAAGGAA GTAAGAAAAA TTGATGATCT TTTAACACAT
TTGCAACGTG AGAAAAATGT TGGCGACACA CTAGATTTGG GAATCATTAG AGATGGTAAG
GCAATTAATG TCGTTCTTAC TCTTGAACCA AGGCCTGGAT CATAA
 
Protein sequence
MFRNNSKILL GGVVFSVVLM LGLSVAFLSP VLAQDNSYSS ENLQSNVESS SDLSLVEIFE 
RSEFGVVSIA VTKTSPHGDA SGVGSGFIFD KEGHIITNNH VVRDSKKIDV TFTDGTSYRA
KVVGTDPYAD IAVLKIDVNS EKLYPLPIGD SSNLKVGEQI TAIGNPFGLS GSMTSGIVSQ
LGRLLPTGVG FSIPDVIQTD TAINPGNSGG PLLNMKGEVV GVNTAIYSSD GSFSGVGFSI
PSNVILKIVP VLITDGEFHH PWVGISSANI TPDLAELLNL EDAKGVLVMT VVKDSPANKA
GLRGSSETAV YDEIEYTIGG DIILSIDGKE VRKIDDLLTH LQREKNVGDT LDLGIIRDGK
AINVVLTLEP RPGS