Gene Nmar_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1143 
Symbol 
ID5773177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1046241 
End bp1046906 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content38% 
IMG OID641316786 
ProductDSBA oxidoreductase 
Protein accessionYP_001582477 
Protein GI161528651 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0385378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC AATACTTTTC TCTAATAGTA ATTGCTGCAG GAGTAATAAC AGTAGGAGCC 
ATATTTTCAA CAACATCAAA TGATTCAGAA TCAATTAATC TGGACATGAA TAGAAAAATC
GGTACTGTTG ATACATCGCT TGGCTCTCCA ATACTAGGAT CACCTAATGC TCCCATTACA
ATAATAGAAT TCGGAGATTA CCAGTGTTCA AATTGCAAAA AATGGTTTCT AGACACAAAG
CCGGACATTA TGACAAATTA CATAGATACA GGCAAAGTTA ACCTGGTCTT TGTAGATATT
GCATTCCTAG GAAAGGATTC AGGTCCCGCA TCAGTTGCAA CTTACTGTGC CGAGGAACAA
GGCAAGTATT GGGAATATCA CGGATTTTTG TATTCAAATC AAATGTCAAT TGACAATGGC
TGGGCTAATT CAGACAGTTT GAAAGGCTAT GCAAACAATC TAGGACTAAA TATGGAGATG
TTTGTAAGCT GTCTTGATTC TGAGAAATAT TCAAAACGTG TTCAATTCAA CACAGATGAG
TCAAAAAGAA ACGGAGTCAC AGGTACGCCC ACATTTTTCG TCATAGGACC TAACGGCGAA
CAAGAGAAAA TAGCAGGGCC ACAACCATAC ACGGTATTTG AAAAGACAAT CGAGTCAATG
ACATAA
 
Protein sequence
MKIQYFSLIV IAAGVITVGA IFSTTSNDSE SINLDMNRKI GTVDTSLGSP ILGSPNAPIT 
IIEFGDYQCS NCKKWFLDTK PDIMTNYIDT GKVNLVFVDI AFLGKDSGPA SVATYCAEEQ
GKYWEYHGFL YSNQMSIDNG WANSDSLKGY ANNLGLNMEM FVSCLDSEKY SKRVQFNTDE
SKRNGVTGTP TFFVIGPNGE QEKIAGPQPY TVFEKTIESM T