Gene Nmar_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1132 
Symbol 
ID5772986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1035937 
End bp1036419 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content34% 
IMG OID641316775 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001582466 
Protein GI161528640 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.179229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGCA AACAAAAAGA GAAACCTTCT GTTAAAAAAG AAAAAAGACT AGAATCAATC 
AAAAAAGCAC ATAGCCAAAA AAATTCGTTT ACTACAACTA TGGAAGACTA TCTTGAAGTG
ATCTATGAAT TGGTTGAATT AAAAGGACAC GCATCTCCTA CTGACATTTC AAACTATATG
GGAGTTCGTC CACCTAGCGT AACTAAAATG CTACAGAAAT TAGATTCTGC TGGCTGTCTG
GAATATGCCA AGTATCGTGG AATAAAACTA ACTGCCAAAG GAATCAGTAT TGCAAATGAC
ATACGCCAAA AACACAGTGA ATTGTTGAAC TTTTTTGAAA TTATTGGAGT GGATAGATCC
ATTGCAAACA AGGATGCAGA GGGAATAGAG CATCACATAA ACCCAAAAAC TATGAAACAA
CTAAGAAAAT TTACCACTTT TCTAAAATCC AATCCTGATT TACTTGTTTT ATTTAACAAA
TGA
 
Protein sequence
MTGKQKEKPS VKKEKRLESI KKAHSQKNSF TTTMEDYLEV IYELVELKGH ASPTDISNYM 
GVRPPSVTKM LQKLDSAGCL EYAKYRGIKL TAKGISIAND IRQKHSELLN FFEIIGVDRS
IANKDAEGIE HHINPKTMKQ LRKFTTFLKS NPDLLVLFNK