Gene Nmar_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1121 
Symbol 
ID5774077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1025889 
End bp1026476 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content38% 
IMG OID641316763 
ProductDNA protection protein DPS 
Protein accessionYP_001582455 
Protein GI161528629 
COG category[R] General function prediction only 
COG ID[COG2406] Protein distantly related to bacterial ferritins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.543654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CAAAGGAACC TAACGTAGTT GGGATTAATG TCCTAAAGCA AAATGGTGTA 
GATGTTGATG AATTAGTAAA TGAGCTAATC AAAAATGCAG CCGTAGAATT TACTGCATAC
TACTACTTTA CCAACCTTAG AGCACACTGC ACAGGCATGG AGGGAGAAGG ACTCAAAGGA
ATTATTGAAG ATGCCAGACT AGAAGACCTC AGTCATTTTG AATCATGTAT TGAGAGAATC
TATCAATTAG GTGGTTCACT TCCAAATGAT GCAACTGAAT TTATCAAAAT TTCAGGATGT
GAGTTTTTAC AACTTCCACC AAATCCAACT GATCACAAAG CAATTCTAGA GAAATGTCTC
AAAGCAGAAC AAGGTGCAAT TGTCAACTGG AATAAAATTT GCAAGATGAC ACTTGGAAAA
GATCCAGCAA CATATGATAT TGCAAAAGAC ATCTTGGCTG AAGAGATCGA GCATGAGTCT
TGGTTCTTAG AGTTAATCTA TGGAAGACCA TCAGGACACA TGAGAAGAAA GTATGCTGGA
GAAAGACCAC ATACAAGAAA ACACTCTAGA GCTCTTGATA TGGCCTAA
 
Protein sequence
MSESKEPNVV GINVLKQNGV DVDELVNELI KNAAVEFTAY YYFTNLRAHC TGMEGEGLKG 
IIEDARLEDL SHFESCIERI YQLGGSLPND ATEFIKISGC EFLQLPPNPT DHKAILEKCL
KAEQGAIVNW NKICKMTLGK DPATYDIAKD ILAEEIEHES WFLELIYGRP SGHMRRKYAG
ERPHTRKHSR ALDMA