Gene Nmar_1118 details

Gene Information

• Locus tag: Nmar_1118
• ID: 5774533
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 1020603
• End bp: 1021166
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641316760
• Product: 5-formyltetrahydrofolate cyclo-ligase
• Protein accession: YP_001582452
• Protein GI: 161528626
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0212] 5-formyltetrahydrofolate cyclo-ligase
• TIGRFAM ID: [TIGR02727] 5,10-methenyltetrahydrofolate synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.424364
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGAAAATA ATTCTGAAAA AAAATCACTG CGAAATCTTC TTTTAGAAAA AAGAGATGGT 
ACATCATTTG ATTTGATGAA GATTGCCAGT GAAAAAATTA GTAAAAAATT AAAAAAAATT 
AAAACTTTCA GAGATGCTCA AAAGATTGGC GCATACTATC CAATTGGAAG TGAAGTACCA 
ACTCAAGACA TTATTCAAGA ATTGCTCAGT GATGGAAAAG AGGTATTCTT GCCAAGAGTG 
TCAGGAGAAA ACATGGATTT TAAGAAAATT AGTGATTTTT CGAGCCTAGA AAGTGGAAGT 
TTTGAGATAA TGGAGCCAAA GATAGATTGT GAGACTGAAA ATAACTTGGA TGTAATTCTA 
GTACCTACTG TAGGCATTAC CCCAAAAGGA ATCAGATTAG GATACGGACA TGGATTCTAT 
GACAGATTTT TGTCAAATCA CAAAATATCA ACAATTTCTC TAACACTTGA AAAACAAGTT 
GTAAAAAATA TCCCAAAATC TGATCATGAC ATACTAATTG ATTGGGTTGT CACTGAAGAC 
AGAATTATAG ATACTCATAG ATAA 

 

Protein sequence

MENNSEKKSL RNLLLEKRDG TSFDLMKIAS EKISKKLKKI KTFRDAQKIG AYYPIGSEVP 
TQDIIQELLS DGKEVFLPRV SGENMDFKKI SDFSSLESGS FEIMEPKIDC ETENNLDVIL 
VPTVGITPKG IRLGYGHGFY DRFLSNHKIS TISLTLEKQV VKNIPKSDHD ILIDWVVTED 
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