Gene Nmar_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1097 
Symbol 
ID5773190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1000385 
End bp1000831 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content37% 
IMG OID641316739 
ProductDoxX family protein 
Protein accessionYP_001582431 
Protein GI161528605 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTC AAAGGCCAGA ATCAATGAAT ACAGAAGCAA CCCTAAAGGG AAATGTATTA 
CATGACATTA CCCACTGGGG AATTAGCGCA TCTATTGGTG TGACATTCAT TGTTCATAGC
ATAAAGAAAT TTGATCCTGG ATGGCAAGAG TGGTTAATTT CAATAGGAAT TCCACCTGAG
CTTCAATTAC CAATTGCTCT AGCTGAATTT ATTGGAGGAG TATTACTTGT TGTAGGAGTT
CTGTCTAGAA TTTCTGCCGT AATATTATCA GTAATTTTAC TTGGAGCGAT ATTTCACATC
AGGTGGGAAA ATGGATTTTT TGTTTCCAAA GGAGGATGGG AATGGGATTT AGTAATGCTA
GCTGCAACAC TTGCAATCAT AGCAGCAGGG CCAGGTAGAA TTTCAATATC TCATGTAGCA
AAAAAGATTC CTAGATTCTT ACAGTGA
 
Protein sequence
MIFQRPESMN TEATLKGNVL HDITHWGISA SIGVTFIVHS IKKFDPGWQE WLISIGIPPE 
LQLPIALAEF IGGVLLVVGV LSRISAVILS VILLGAIFHI RWENGFFVSK GGWEWDLVML
AATLAIIAAG PGRISISHVA KKIPRFLQ