| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1092 |
|---|
| Symbol | |
|---|
| ID | 5773464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 996256 |
|---|
| End bp | 996711 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641316734 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001582426 |
|---|
| Protein GI | 161528600 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG CAAAACTCAA GGAATTAGGA ATAGAATTAC CAGAAGCCCC AATACCTGCA
GGAAACTATA TCCCAGCAGT AAAAACAGGA AACCTACTTT TCATATCAGG ACAGATTCCA
CTAGAAAATG GCAAGGTAGC ATACACTGGT AAAGTTTCAG ATGACAATCT AGAGACTGCT
CAGAAATCAG CTAAAAGTTG TGCAATTAAC ATTCTAGCTC AAATTAAAAG AGAAGCTGGA
AGTTTGGATA AAGTAACAAA AATCGTAAGA CTGTCAGGAT TTGTAAATTC AGTTCCAGAA
TTCACACAGC ATCCAAAAGT AATCAATCCG GCATCAGATT TGATGTTTGA GGTTTTTGGA
GAAAAAGGAA AACATGCAAG AATAGCATTA GGTGCAGGAA GTTTACCACT TGATTCCATG
ACTGAAATTG ATGCCATCGT AGAATTATCA GAATAA
|
|---|
| Protein sequence | MSEAKLKELG IELPEAPIPA GNYIPAVKTG NLLFISGQIP LENGKVAYTG KVSDDNLETA
QKSAKSCAIN ILAQIKREAG SLDKVTKIVR LSGFVNSVPE FTQHPKVINP ASDLMFEVFG
EKGKHARIAL GAGSLPLDSM TEIDAIVELS E
|
|---|
| |