| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1088 |
|---|
| Symbol | |
|---|
| ID | 5773969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 992659 |
|---|
| End bp | 993852 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641316730 |
|---|
| Product | ATPase central domain-containing protein |
|---|
| Protein accession | YP_001582422 |
|---|
| Protein GI | 161528596 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGG CTCCCCAAGA ACTAGAAAAT ACTGCTAGCA AATATGCTTC TGAGGCAATC
AAATTTGATT CCCAAGGAGC ACGTGGCCAA GCAATAACCT ATTATCAGCA AGCCATTGAT
GCTCTGGTAA AATTATTACA GTTATACCCT AACAGCAAAT TAAATCCAAT TTACAAAGAA
AGATGCAACT CTTATCATAA TCGAATTAAT GCATTGCAGC AGGCACATGG TGTAGAACCT
GCAGTTGATC CAAAGGCTTC AGAAGAAGAA CAAAAGAAAT CTGTTCAGAG ACAAGAGGCA
GAAAATGACT TTGAAGACCT TATCATGAAA GAAAAACCAG ATGTAACTTG GGACCAAGTC
ATTGGTTTAG ATGACGCAAA AAGTGCATTA CGTGAATCAA TCGTATATCC AACTAAAAGA
CCTGATTTAT TCCCATTAGG TTGGCCAAAA GGAATGTTAC TTTATGGTCC TCCTGGAACT
GGTAAAACAA TGTTAGCAGC TGCTACTGCA AATGAGATGG ATGGTTACTT TATCAATGTA
GATGCATCAT CTATGATGAG CAAGTGGTTA GGCGAAGCAG AAAAGAATGT TTCAAAATTA
TTTTCAATGG CAAGAAGTTA TGCTGAAAAG GAAGGCAAAC CTGTGATTTT GTTTGTAGAT
GAAGTTGATT CTCTATTAGG TTCTAGAAGC AGTGAAGTCG GTGGAGAAGT TAGAACTAAA
AATCAATTCC TAACTGAGAT GGATGGTGTT AATGGCAAAG GAAAAGATTT GATGATGTAT
GTAATTGGTG CAACAAACAA ACCTTGGGCA CTTGATTGGC CTTTCCTTAG AAGATTCCAA
AAGAGAATTT ACGTATCACT GCCTACTCAA GCAGCAAGAG AAAATCTCTT TGATCAATAC
ACTGCTAAAT TAAGCAAAGA TTCTAGAGTA AGCACTACTG ATCTTGCAAA ACTCTTTGAT
GGTTATAGTG CAAGTGACAT CAAAGATGTT TGCCAAGCTG CACAAATCAA AACAGTACAT
GAAATATTTG ACTCTCCTGA TTATCATGAA CCAGTAGAAG GAGAAGAACC AGTTCAACCT
AGAGAACTTA CATCAACTGA TTTCAAGGAT ATTATGGCAA GAAGAAAGCC AAGTGTTTCA
ACTGAAATGA TTCGTGCATA TCACAAATGG AGCGAAGAGT TCCAAGCACT ATGA
|
|---|
| Protein sequence | MSMAPQELEN TASKYASEAI KFDSQGARGQ AITYYQQAID ALVKLLQLYP NSKLNPIYKE
RCNSYHNRIN ALQQAHGVEP AVDPKASEEE QKKSVQRQEA ENDFEDLIMK EKPDVTWDQV
IGLDDAKSAL RESIVYPTKR PDLFPLGWPK GMLLYGPPGT GKTMLAAATA NEMDGYFINV
DASSMMSKWL GEAEKNVSKL FSMARSYAEK EGKPVILFVD EVDSLLGSRS SEVGGEVRTK
NQFLTEMDGV NGKGKDLMMY VIGATNKPWA LDWPFLRRFQ KRIYVSLPTQ AARENLFDQY
TAKLSKDSRV STTDLAKLFD GYSASDIKDV CQAAQIKTVH EIFDSPDYHE PVEGEEPVQP
RELTSTDFKD IMARRKPSVS TEMIRAYHKW SEEFQAL
|
|---|
| |