| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1070 |
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| Symbol | |
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| ID | 5774676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 942007 |
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| End bp | 943524 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316712 |
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| Product | isopropylmalate/citramalate/homocitrate synthase |
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| Protein accession | YP_001582404 |
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| Protein GI | 161528578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATG TTAGAATTTT TGATACAACA TTAAGAGATG GAGAGCAAAC ACTTGGTGTT
TCATTATCTC CTGATCAAAA ATTAGCAATT GCAAAAAAAT TAGATGAATT AGGCGTTGAT
GCTATAGAAG CTGGTTTTCC AGTAATTTCA GAAGGTGAAT TACAAGCAGT CAAGATGATT
ACTGCTGCTG GATTGTCATC TGAAATTTGT GGATTAACTA GAACTATCAA AAAAGACATT
GATGCAGCAA TTGATGCAGG ATTAAACTAT GTGCATACTT TTATTGCAAC ATCTGACATT
CACTTGGAAC ACAAACTCCA GATGACCCGT GAACAAGCAT TAGAAAAAGC AATTGAGGCA
GTTGAGTATG GTAAATCTCA TGGTTTGCAA GTAGAGTTTT CAGCTGAAGA TGCTTCTAGA
ACTGATAGGG AATTTTTGAA AAAAGTTTTC AGCGAAGTTG CAAAAGCAGG AGCTGATAGA
GTAAACATTC CTGACACTGT TGGTTATTCC ACTCCAGAAT ATATGGCACA AATTACAAAA
GATACCATCG AAGCTACAAA CTTGCCAGTA AGTGTTCACT GTCACAATGA CTTTGGATTA
GCTGTCGCAA ATGCTTTGGC TGGAATTCAT GTTGGTGCAG CATGTGCACA TGTTACAATC
AATGGAATTG GTGAACGTGC AGGCAATGCC TCATTAGAGG AATTATCCAT GGCACTCAAG
TGTTTGCCAT ATGAGCAAAA ATATGAGACT AATATCAAAT CAGAATTAAT TTATGATGTA
TCTCGATTCA TCTCTAAAAC TGTAGGAATT ATTGTTCAAC CAAACAAGGC TATAGTTGGT
GCCAATGCAT TTGGTCATGA ATCCGGCATT CACACTCATG GTGTATTGAA TAATCCCTTA
ACTTACGAAC CAATCAGCCC TGAATTAGTA GGACGAAAGA GATGGCTCAA AGTAGGAAAG
CATGCAGGAG TTCATGGAAT GAATGCAATG TTAGAAGAGT ATGGAGTAAA ACCCACTGAA
GATCAAGCAA AACAAATCTT GGAAAAAGTC AAGGTGTTAG GTGACCAAGG AAAACAAATC
ACTGATGTTG AACTCTTGTC CATGGCAAGT GAAGTTTTAG GTAAAAAAGA TCTTAAACGA
ATTGTACAGT TAACTGGATT CTCTGTTTCA ACTGGAATTG GAACAATGCC TTATGCATTT
GTTAAACTCA ACGTTGATGG ACAAGATCAT ATTGGAACTG ACTATGGAGT AGGTCCAGTT
GATGCAGCAT TAAACGCAAT TCAGAAAATT ACTGGCAAGA TTTCAGAAAT TAGAATCAAA
GACTATGGAT TGGCATCAAT CTCTGGCGGT TCTGGTGCTT TATGTGAAGT TACTGTAAAG
GTGGAGGATC CATTAGGTAA CAAGGTTTCA GCAAAATCAG TTGGAGAGGA CATTGTTACT
ACTTCTGTTA AGGCAGTTAT TGATGCAATT AACAGAATCA TGCTCAAAAA GATGCTACAA
GAAAAACAGG TAAGCTAA
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| Protein sequence | MTNVRIFDTT LRDGEQTLGV SLSPDQKLAI AKKLDELGVD AIEAGFPVIS EGELQAVKMI
TAAGLSSEIC GLTRTIKKDI DAAIDAGLNY VHTFIATSDI HLEHKLQMTR EQALEKAIEA
VEYGKSHGLQ VEFSAEDASR TDREFLKKVF SEVAKAGADR VNIPDTVGYS TPEYMAQITK
DTIEATNLPV SVHCHNDFGL AVANALAGIH VGAACAHVTI NGIGERAGNA SLEELSMALK
CLPYEQKYET NIKSELIYDV SRFISKTVGI IVQPNKAIVG ANAFGHESGI HTHGVLNNPL
TYEPISPELV GRKRWLKVGK HAGVHGMNAM LEEYGVKPTE DQAKQILEKV KVLGDQGKQI
TDVELLSMAS EVLGKKDLKR IVQLTGFSVS TGIGTMPYAF VKLNVDGQDH IGTDYGVGPV
DAALNAIQKI TGKISEIRIK DYGLASISGG SGALCEVTVK VEDPLGNKVS AKSVGEDIVT
TSVKAVIDAI NRIMLKKMLQ EKQVS
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