Gene Nmar_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1064 
Symbol 
ID5773755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp937290 
End bp938225 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content36% 
IMG OID641316706 
Productoligopeptide/dipeptide ABC transporter ATPase subunit 
Protein accessionYP_001582398 
Protein GI161528572 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTC TAACTGTTAA TGGATTAACA TCACGATACG ATTCATCAAA AGGTCCAGTT 
TATGCTGTAG AAGATGTTGA TTTTACATTA GAAGATGGTG AATCAATAGG AATTGCAGGT
GAAAGCGCAT GTGGAAAGAG TACTCTGGGG TTGTCTATTA TTAGGATGCT TGCAGGTGGA
AAAACTCAAG GCAAGATCCA TTTTGATGAA AATTCAATCT TGGATGTTGA TGAGAACACA
TTTGAAAAAA CATTTCGATG GAAAAAAATT TCCATGGTCT TTCAGGGCGC AATGAATTCT
CTTGATCCTG TTTTTACAAT CAATGATCAA TTTCTTGAAA TTTTAAAACA ACATAATTTT
GATGGTGATT CAAAACAGGT AATTGCTGAT GCAATGAACT CTGTTAATCT TGATGTAAAT
GTGCTCAAAA AATATCCTCA CGAACTTAGC GGTGGAATGA AACAAAGAGT TGTAATTGCC
ATGGCTTTGT TGTTAAAACC AAAGTTTGTG ATTGCAGACG AACCAACAAC TGCACTTGAT
GTGTTGATTC AAGCACAAAT AATCAATCTA CTAAAATCTC TAAAAAAATC CGGCATGTCA
TTTATGCTAA TTACGCACGA TTTAGCCGTG CTTTCTGAGA TTGCAGACAA AATTGGAATT
ATGTATGGCG GACAGATTGT AGAATTTGGT TCGTCTCAAG AGATTTACAA AAATCCAAAA
CATCCATACA CTCAAGGACT TTTACAGTCA ATTCCTACTC TAAAAGGAAA CAAGCCAACA
TACATCAAAG GAATTCCTCC CAGTTTGCTT GACGCACCAA CGCAATGTCG ATTTATTGAC
AGGTGTCCCT TGGCAGTTGA AAAATGCAAA CAACTTCCGC CCAAATTTAA AACCAAGACT
GGTTATGTCC AATGCTGGTT GTATGAAGAT AAATAA
 
Protein sequence
MAFLTVNGLT SRYDSSKGPV YAVEDVDFTL EDGESIGIAG ESACGKSTLG LSIIRMLAGG 
KTQGKIHFDE NSILDVDENT FEKTFRWKKI SMVFQGAMNS LDPVFTINDQ FLEILKQHNF
DGDSKQVIAD AMNSVNLDVN VLKKYPHELS GGMKQRVVIA MALLLKPKFV IADEPTTALD
VLIQAQIINL LKSLKKSGMS FMLITHDLAV LSEIADKIGI MYGGQIVEFG SSQEIYKNPK
HPYTQGLLQS IPTLKGNKPT YIKGIPPSLL DAPTQCRFID RCPLAVEKCK QLPPKFKTKT
GYVQCWLYED K