| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1057 |
|---|
| Symbol | |
|---|
| ID | 5774541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 932353 |
|---|
| End bp | 932916 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641316699 |
|---|
| Product | DNA-3-methyladenine glycosylase |
|---|
| Protein accession | YP_001582391 |
|---|
| Protein GI | 161528565 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATATTGA ATACACTTCC TAGAAAATTT TATCTTCAAG ACACAGTAAC TGTTGCAAAA
AATTTGTTAG GTAAAAAAAT AATCAGAAAA ATAGGAAGGA ATGAAATTTC AGGAATAATC
ACAGAGACAG AAGCTTACAA ACACAAAGAC GATCCTGCAA GTCACGCATA TAGAAAAATT
ACAGATAGAA ACAAGGCAAT GTTTGGCGAT GTGGGAATTG CTTACGTGTA TTTCACATAT
GGGATGTATT ACTGTTTTAA TGTAGTAGCT AGAAACCCAA AAGTTGCAGC AGGAGCAGTA
TTGATTCGAG CAATTGAACC AGAAAAAGGA ATTAAAAGAA TGCAAGAAAA TCGGAATAAA
AAAGATTTGA AAAATCTTAC AAACGGACCT GCAAAATTAA CTCAAGCATT AGAAATCACT
AAAGAACAAT ACGGCGTAGA TTTGACTAAA GATTCAAAAT TATACATTAC CAAAGGAATA
GAGGTAAAAA AAATAACTTC ATCACCTAGA ATAGGAATCA AAGAGGCAAC AGACAAGTTA
TGGAATTTTA AGATAAATAT CTAA
|
|---|
| Protein sequence | MILNTLPRKF YLQDTVTVAK NLLGKKIIRK IGRNEISGII TETEAYKHKD DPASHAYRKI
TDRNKAMFGD VGIAYVYFTY GMYYCFNVVA RNPKVAAGAV LIRAIEPEKG IKRMQENRNK
KDLKNLTNGP AKLTQALEIT KEQYGVDLTK DSKLYITKGI EVKKITSSPR IGIKEATDKL
WNFKINI
|
|---|
| |