Gene Nmar_1056 details

Gene Information

• Locus tag: Nmar_1056
• ID: 5774172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 931785
• End bp: 932375
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641316698
• Product: phage SPO1 DNA polymerase-related protein
• Protein accession: YP_001582390
• Protein GI: 161528564
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1573] Uracil-DNA glycosylase
• TIGRFAM ID: [TIGR00758] uracil-DNA glycosylase, family 4

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 51
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCAGT TAGAGACAAT AAAACAGAAT GTGATTAAAT GTACAAAATG TGATTTGTAT 
AAAACAAGAA CAAATTCAGT TCCAGGTAAA GGTAATTTTC AATCAGACGT GATATTTGTT 
GGGGAGGCAC CTGGAAGAAA CGAGGATAAG AATGGAGAGC CATTTGTAGG TGCAGCAGGA 
AAGAAACTTT CTGCAGCATT AGAAGGGGCA GGAGTTTCTA GAGAGGATGT ATACATTACC 
AATGTTGTAA AATGTAGACC TCCAAACAAC AGAGTACCAA ATACGAACGA AAGAGACACG 
TGTAAAGAGT ATCTAAAAAA TGAAATTTTA ATAATCAAAC CAAAAATTAT TTGTGTTTTA 
GGAAATACAG CATTTAATTC AGTTCTAGGC GGTTCAGAGA TTACAAAATT CAGAGGAAAA 
TTAGTGAGAA AAGATAACCA ATTGTATTTT TTGACAATTC ATCCTGCTGC AACAATATAC 
AATCAAGAAT TAATCTCCAC ATTAAATGAA GATATTAAAA AACTCTTTAA TTTAATCACA 
GAGTTAAAAA ACAACAAAAT AGTTTCAATT GATATTGAAT ACACTTCCTA G 

 

Protein sequence

MNQLETIKQN VIKCTKCDLY KTRTNSVPGK GNFQSDVIFV GEAPGRNEDK NGEPFVGAAG 
KKLSAALEGA GVSREDVYIT NVVKCRPPNN RVPNTNERDT CKEYLKNEIL IIKPKIICVL 
GNTAFNSVLG GSEITKFRGK LVRKDNQLYF LTIHPAATIY NQELISTLNE DIKKLFNLIT 
ELKNNKIVSI DIEYTS