Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1046 |
Symbol | |
ID | 5774058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 919769 |
End bp | 921361 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641316688 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001582380 |
Protein GI | 161528554 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTAT TTTACAGAAA TGCAATTGTT CTTAGTACAT TAAATATTGC AGTAGTACTT ATCCTTGCAG GAATAGTTTT TGAAAGCATC AAAAATGACA AAGTAGAAAA TATTTTATCT GAAAAACAAT TTGAAATAAA TTTCAAAGCA GCGGATTTTA GAGATTTGGT TCGTTCAAAC ATAGAGCAAA CAAAACTGCT ATCAATTATG CCAGAGATTC AAGGGATTGT AAAGTTTACA GATTATGGCA GTTCGGGAAG CTTTCAATTT GATGAAGGGT TTTGGTCAGA GTTATTAGAA GAAAAATTCA CAGAAATTAT AAAAAACAAT CCAAATATCC ATCAAATTCA AATTTTTAGT TTTAACGGAA ATGAAATCAT ACATATTTTT TCAGAGAATA GTGGACTACA CGTAGAAGAT AGTAATGAAC TCAAACATTC AATGAGTAAC GATGTGTTAC AAAAAGTAAC AAAGTTACAA AATAATGAAG TGGAAATATC AAGTATAAAA CTTAGTGAAG TAAATAACAA AATCGAAGTT CCTCACAAAC CAATTCTCGA GGTAACTACG CCAATTTTTC TTAGTAATGA TGAACAATTA GGATATTTGA AAATCACTTA TGACATGCAA GATTTTTTGT ATGAACTCAG TCAGAGTGCA AGTGGAAAAA TGCTAACAAT AGACAATAAA GGATATTTCA TTGATCATCC CGATAAATCA AAAATATTTG GCGATAAATT AGGCACAGGT ATCAATTATT TTTCAGATCA GCCAGAATTG AAGAAAAATT TGGAGATATC AGATAATAAA TTCCACTATG ATGAAGATGA GCAAGAATAT AGGATATGGA ACAAGATATC TTATGACAAA AATGATACAT CAAATTATTG GGTGGTAGTA TCAGTAACTA CAGAAGAAGA ATTATTTTTG TCAGTTGAGC AATTGAGGTC AGACGTACAA CTAGTCATGA TTCCCTTTTT GGCAATAACA ATAGTTGTCA CCATAATAAT TTCAAGACAC ATGTCAAAAC CAATCGAAGT TCTAACTGAA AAAATTCTCA AAATAAAAAA AGGGGAGAGT GGAGATTTGA TCAATATCAA AGGAAATAAT GAGATTTCTC AACTTGGTAA TGCATTTAAC AAGATGACAA AATCGTTAAG TCAATCACAG CACACATTAA AAGAATACGA GCAGGCAATG AAAAGCAGTC TTGCAGATGC CAAGAAATTT TACAATCAAA TAGACCAATC AACTGCAATA TCAAAATTTG ACATTAATGG AGACTTGACA TATGTTAATG AAAAATTCTG CAAGATGACA AAATATACTA AAGAAGAGTT AATGGGACAA AATCAAAAGA TTCTAAGATC AGGATATCAT GATGAAAAGT TTTATCGTGA AATGTGGAAA ACCATTCTAT CAGGAAAGAT CTGGACAGGG AATTTAAAAA ATAAAGCAAA AGACGGTTCA TATTTTTGGG AAAAAAAGAT CATAATTCCA GATGAAAACT CTGAAAATGA GATTATTGGA TTTTTAGCAA TTCAAATTGA CATACAAGAT CTGATGGAAA AAAATTCAAA GGATTGGACA TAA
|
Protein sequence | MKLFYRNAIV LSTLNIAVVL ILAGIVFESI KNDKVENILS EKQFEINFKA ADFRDLVRSN IEQTKLLSIM PEIQGIVKFT DYGSSGSFQF DEGFWSELLE EKFTEIIKNN PNIHQIQIFS FNGNEIIHIF SENSGLHVED SNELKHSMSN DVLQKVTKLQ NNEVEISSIK LSEVNNKIEV PHKPILEVTT PIFLSNDEQL GYLKITYDMQ DFLYELSQSA SGKMLTIDNK GYFIDHPDKS KIFGDKLGTG INYFSDQPEL KKNLEISDNK FHYDEDEQEY RIWNKISYDK NDTSNYWVVV SVTTEEELFL SVEQLRSDVQ LVMIPFLAIT IVVTIIISRH MSKPIEVLTE KILKIKKGES GDLINIKGNN EISQLGNAFN KMTKSLSQSQ HTLKEYEQAM KSSLADAKKF YNQIDQSTAI SKFDINGDLT YVNEKFCKMT KYTKEELMGQ NQKILRSGYH DEKFYREMWK TILSGKIWTG NLKNKAKDGS YFWEKKIIIP DENSENEIIG FLAIQIDIQD LMEKNSKDWT
|
| |