Gene Nmar_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1046 
Symbol 
ID5774058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp919769 
End bp921361 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content30% 
IMG OID641316688 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001582380 
Protein GI161528554 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TTTACAGAAA TGCAATTGTT CTTAGTACAT TAAATATTGC AGTAGTACTT 
ATCCTTGCAG GAATAGTTTT TGAAAGCATC AAAAATGACA AAGTAGAAAA TATTTTATCT
GAAAAACAAT TTGAAATAAA TTTCAAAGCA GCGGATTTTA GAGATTTGGT TCGTTCAAAC
ATAGAGCAAA CAAAACTGCT ATCAATTATG CCAGAGATTC AAGGGATTGT AAAGTTTACA
GATTATGGCA GTTCGGGAAG CTTTCAATTT GATGAAGGGT TTTGGTCAGA GTTATTAGAA
GAAAAATTCA CAGAAATTAT AAAAAACAAT CCAAATATCC ATCAAATTCA AATTTTTAGT
TTTAACGGAA ATGAAATCAT ACATATTTTT TCAGAGAATA GTGGACTACA CGTAGAAGAT
AGTAATGAAC TCAAACATTC AATGAGTAAC GATGTGTTAC AAAAAGTAAC AAAGTTACAA
AATAATGAAG TGGAAATATC AAGTATAAAA CTTAGTGAAG TAAATAACAA AATCGAAGTT
CCTCACAAAC CAATTCTCGA GGTAACTACG CCAATTTTTC TTAGTAATGA TGAACAATTA
GGATATTTGA AAATCACTTA TGACATGCAA GATTTTTTGT ATGAACTCAG TCAGAGTGCA
AGTGGAAAAA TGCTAACAAT AGACAATAAA GGATATTTCA TTGATCATCC CGATAAATCA
AAAATATTTG GCGATAAATT AGGCACAGGT ATCAATTATT TTTCAGATCA GCCAGAATTG
AAGAAAAATT TGGAGATATC AGATAATAAA TTCCACTATG ATGAAGATGA GCAAGAATAT
AGGATATGGA ACAAGATATC TTATGACAAA AATGATACAT CAAATTATTG GGTGGTAGTA
TCAGTAACTA CAGAAGAAGA ATTATTTTTG TCAGTTGAGC AATTGAGGTC AGACGTACAA
CTAGTCATGA TTCCCTTTTT GGCAATAACA ATAGTTGTCA CCATAATAAT TTCAAGACAC
ATGTCAAAAC CAATCGAAGT TCTAACTGAA AAAATTCTCA AAATAAAAAA AGGGGAGAGT
GGAGATTTGA TCAATATCAA AGGAAATAAT GAGATTTCTC AACTTGGTAA TGCATTTAAC
AAGATGACAA AATCGTTAAG TCAATCACAG CACACATTAA AAGAATACGA GCAGGCAATG
AAAAGCAGTC TTGCAGATGC CAAGAAATTT TACAATCAAA TAGACCAATC AACTGCAATA
TCAAAATTTG ACATTAATGG AGACTTGACA TATGTTAATG AAAAATTCTG CAAGATGACA
AAATATACTA AAGAAGAGTT AATGGGACAA AATCAAAAGA TTCTAAGATC AGGATATCAT
GATGAAAAGT TTTATCGTGA AATGTGGAAA ACCATTCTAT CAGGAAAGAT CTGGACAGGG
AATTTAAAAA ATAAAGCAAA AGACGGTTCA TATTTTTGGG AAAAAAAGAT CATAATTCCA
GATGAAAACT CTGAAAATGA GATTATTGGA TTTTTAGCAA TTCAAATTGA CATACAAGAT
CTGATGGAAA AAAATTCAAA GGATTGGACA TAA
 
Protein sequence
MKLFYRNAIV LSTLNIAVVL ILAGIVFESI KNDKVENILS EKQFEINFKA ADFRDLVRSN 
IEQTKLLSIM PEIQGIVKFT DYGSSGSFQF DEGFWSELLE EKFTEIIKNN PNIHQIQIFS
FNGNEIIHIF SENSGLHVED SNELKHSMSN DVLQKVTKLQ NNEVEISSIK LSEVNNKIEV
PHKPILEVTT PIFLSNDEQL GYLKITYDMQ DFLYELSQSA SGKMLTIDNK GYFIDHPDKS
KIFGDKLGTG INYFSDQPEL KKNLEISDNK FHYDEDEQEY RIWNKISYDK NDTSNYWVVV
SVTTEEELFL SVEQLRSDVQ LVMIPFLAIT IVVTIIISRH MSKPIEVLTE KILKIKKGES
GDLINIKGNN EISQLGNAFN KMTKSLSQSQ HTLKEYEQAM KSSLADAKKF YNQIDQSTAI
SKFDINGDLT YVNEKFCKMT KYTKEELMGQ NQKILRSGYH DEKFYREMWK TILSGKIWTG
NLKNKAKDGS YFWEKKIIIP DENSENEIIG FLAIQIDIQD LMEKNSKDWT