Gene Nmar_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1033 
Symbol 
ID5774664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp907455 
End bp907763 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content40% 
IMG OID641316675 
Product30S ribosomal protein S10 
Protein accessionYP_001582367 
Protein GI161528541 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA CCGCCCGTGT AAAACTCACA TCAACCAGTC TACCAAAGTT AGATGGAGTA 
TGTGGGGAAA TCATGGGTAT CGGTAAAAAA ACCGGTGTTA AGGTAAAGGG TCCAACCCCA
CTTCCTGTTA AAAGATTACA CGTTGCTACT AGAAAATCTC CTTGTGGCAA CGGAACTGAA
ACTTATGAGA AATGGGAGAT GAAGATGCAT AGAAGAATTA TCAACATCAA CGCTGACGAC
AAAGCAATAA GGCAATTAAT GAGACTAAAA ATCCCTGATG ACGTCTACAT TGAACTTTCA
TTAACATAA
 
Protein sequence
MTQTARVKLT STSLPKLDGV CGEIMGIGKK TGVKVKGPTP LPVKRLHVAT RKSPCGNGTE 
TYEKWEMKMH RRIININADD KAIRQLMRLK IPDDVYIELS LT