| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1028 |
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| Symbol | |
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| ID | 5773215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 904421 |
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| End bp | 905560 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641316670 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001582362 |
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| Protein GI | 161528536 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTAA AAAATATCAC AATTTTAGGT TCTGGAGTAA TGGGACACGG TATTGCACAG
GTATCAGCTA CTGCAGGGTA TAATGTGGTT CTACGAGATA TCGAACAGGG ATTTTTAGAT
AAAGCAATGG AAAAGATCAG ATGGAGTTTA GATAAACTAG TTTCAAAAGA AAAAATTTCA
AAAGAAGAAG GAGATTCAAT TTTTGGTAGA ATCACACCAG TTGTAGATTT GAAAGAGGCA
GTGAAAGATG CAGAGTTGGT AATAGAAGTA GTTCCAGAAA TTATGGATCT AAAGAAAAAG
GTCTATGCAG AACTAGATGA AGTAGCAGCA CCAGAAGTTA TCTTTGCATC AAATACCAGT
ACATTGCCAA TTACTGAAAT TGCAAATACA ACATCAAGAC CAGACAAATT CATTGGAATT
CATTTCTTTA ATCCTCCGCA ACTGATGAAA TTAGTAGAAG TAATTCCAGG GGAGAAAACA
TCGCAAGAAA TTACAGATTT AACTAAAGAT TATGTCAAGT CAGTTAACAA ACAAGCTGTA
TTATGTAGAA AAGATGTTCC AGGATTTATC ATAAACAGGT TATTCATTCC AATGGTTCAT
GAAGCATGTT ATGCAAAAGA TAGAACAGGT GCAACTCTTG AAGAGATTGA TTCAGCAGTA
AAATTCAATC TAGGATTTCC AATGGGAATC TTTGAGTTAG CAGACTTTAC AGGAATGGAT
GTGATTCACA AAGCAACAGT TGAGATGCAT TTGAGAGACA AAAAAGTAAT CAACCCACAT
CCAACAGTTG AGAAAATGTT TGATGAAAAG AAACTAGGAC AAAAATCAGG GGAAGGATAC
TACAAGTATT CAGATGACAA ATATGAAAGA GTTGAACTTT CTCAAGAGCT TGCTCAGAAA
TTTAATCCCA TTCAACTAGT AGCAAATATT CTAAACAATG CAGCATGGCT TGTAACTAAT
GGTGCAAGCG ACATAGAAGA AATTGAAAAA GCCGCTCAGT TAGGGTTAGG ATTGAAAAAA
CCGCTATTTG AAACAGCAAA AGAAATTGGC ATTAAAAATA TTGTAGATGA GTTAAACAAA
CTTGCCGAAG AACATGGAGA GTTTTACAAA CCAGACCCAC TGCTCACATC AATGCAGTGA
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| Protein sequence | MAVKNITILG SGVMGHGIAQ VSATAGYNVV LRDIEQGFLD KAMEKIRWSL DKLVSKEKIS
KEEGDSIFGR ITPVVDLKEA VKDAELVIEV VPEIMDLKKK VYAELDEVAA PEVIFASNTS
TLPITEIANT TSRPDKFIGI HFFNPPQLMK LVEVIPGEKT SQEITDLTKD YVKSVNKQAV
LCRKDVPGFI INRLFIPMVH EACYAKDRTG ATLEEIDSAV KFNLGFPMGI FELADFTGMD
VIHKATVEMH LRDKKVINPH PTVEKMFDEK KLGQKSGEGY YKYSDDKYER VELSQELAQK
FNPIQLVANI LNNAAWLVTN GASDIEEIEK AAQLGLGLKK PLFETAKEIG IKNIVDELNK
LAEEHGEFYK PDPLLTSMQ
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