| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1019 |
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| Symbol | |
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| ID | 5774228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 899956 |
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| End bp | 900777 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316661 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001582353 |
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| Protein GI | 161528527 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGT TTGGAAAAAA AGAAGACCCT GAAGATTTGA TGTACGAGGG TGTGGGCATG
ATGGAAAAGA ATCAGCCAAA GGCAGCCATT TCATTTTTCA ACAAGGTCCT AAAACAAGAG
CCAGAAAATA CAGAGGCATT ACTTCAAAAG GGGTTGGCAT TAAACTTGAT AAAAAAATAC
CAAGATGCAA TTACTTGTTT TGATAAATTA ATAGAAATTG ATCCTAAAGA TGCCCAAGCC
CTAAACAACA GAGGAATATC CATGGCAGAG ACAGGCAACA TCCAGGGGGC TGCAGAATAT
TATGACAGGG CAATTGAGGC AGATTCCAAA TATGCATCAG CTTATTTCAA CAAAGGCGTA
CTACTAGACA AACTCCAAGA ACATGAAGAG GCATTAACAG TTTTAGAAAA AGCAATAACA
ATTGATCCAA GAAAGCCAAA TGCCATGATC TACAAGGGAA TAGTTCTAGG TAAACTCAAA
AGAAACGAAG AGGCATTGAA TTGCTTTTCA AATGTTTGCA AAAAATATCC AAACAATTTG
GATGCATTTT TCCAAAAAGG AGTTCAGCTA GCTGAATTAG ACCAACATAA AAAAGCACTA
GATGTGTTTG ATGAACTCTT AAAAAAATAC AAAGACAACG TGAATGTGAT TTATGCAAAA
TCACGCAGTA TGGCAGCACT TGAAAAGTAT CCTGAATCAC TAGAATTACT AAAACAAGCA
GTATCCAAAA GTCCCAAAGT TATTCGAGCA TGGGCAAAAG AAGAGCCAAT TTTCACAAAA
TTGCACAGTA ATGATGAATT TAGAAAGATT GTAAAACTAT AG
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| Protein sequence | MGLFGKKEDP EDLMYEGVGM MEKNQPKAAI SFFNKVLKQE PENTEALLQK GLALNLIKKY
QDAITCFDKL IEIDPKDAQA LNNRGISMAE TGNIQGAAEY YDRAIEADSK YASAYFNKGV
LLDKLQEHEE ALTVLEKAIT IDPRKPNAMI YKGIVLGKLK RNEEALNCFS NVCKKYPNNL
DAFFQKGVQL AELDQHKKAL DVFDELLKKY KDNVNVIYAK SRSMAALEKY PESLELLKQA
VSKSPKVIRA WAKEEPIFTK LHSNDEFRKI VKL
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