Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0962 |
Symbol | |
ID | 5774124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 840580 |
End bp | 841332 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641316601 |
Product | hypothetical protein |
Protein accession | YP_001582296 |
Protein GI | 161528470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000273165 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACCTG TCCCAAGAAT TTCCACTCGA GGGTACTATG ATCTAAAAAC TGGTAAAACC CTAAAGCGGA ACAACTATTA CCTTTATCCA AAAAAAGATT TTCAAAAATT AATTGATTCT AAAGAGTTAA CCATTATGAT TCATGGTCTA AGAAATGACA ATGCTGGTGC TATTGCAAAA GCAGTTTTGG CACGTAATCG ATTGAGAAAA TTAGGATATT CTCATCCAGT AATTGGATTT AGTTATGATT CAAACACCAC TGGTGCTCAT TTAATCAAAC ATGCAAAACA TGCTTTAGCT GTAGGACAAA GTATTGCAAA AAAGAACGGA CGGAATCTCG GAAAATTCAT TGAGGATTTT AAAGAATCTA GTCCAAAAAC AAAGATACGA TTAATGGGAC ACTCTCTAGG TTCTCAAGTG ATTCTCAGTA CAATTGAATA TCTTGCTAAA AAGAAACAAA ATTCTGGAAT CCTAGAAAGT GTCTATTTCT TTGGAGCCTC TATAACTGAA GATGTTCCGT CTTCAAAAAA GTATGGTAAG CTACTCCAAA CTGTTGTCAA TAAAAAAATC CTAAATCATT ATGCTCCTTC TGATGAGGTT CTAAGTTGGG CTGATGACAA AAAGTATGTT TTGGGACCCT TAGGTCTAAA TGGTGCAATT GGAAAACCTA TCAAAAAATA TCATCAGAAA CTAGTCAAAC CAAAAAACCA TAGATTTGCA AGTTATGCTG CTGTACTAAA CACATTTCCG TAG
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Protein sequence | MKPVPRISTR GYYDLKTGKT LKRNNYYLYP KKDFQKLIDS KELTIMIHGL RNDNAGAIAK AVLARNRLRK LGYSHPVIGF SYDSNTTGAH LIKHAKHALA VGQSIAKKNG RNLGKFIEDF KESSPKTKIR LMGHSLGSQV ILSTIEYLAK KKQNSGILES VYFFGASITE DVPSSKKYGK LLQTVVNKKI LNHYAPSDEV LSWADDKKYV LGPLGLNGAI GKPIKKYHQK LVKPKNHRFA SYAAVLNTFP
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