Gene Nmar_0953 details

Gene Information

• Locus tag: Nmar_0953
• ID: 5774505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 831494
• End bp: 831889
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641316592
• Product: glyoxalase/bleomycin resistance protein/dioxygenase
• Protein accession: YP_001582287
• Protein GI: 161528461
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
• TIGRFAM ID: [TIGR03081] methylmalonyl-CoA epimerase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.0254493
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGATTG ATCATATTGC AATTGCCGTA AATGATGTTG AAGAATCTGC CAAAGTTTAC 
CAACAAGCAT TAGGTGTTGA CTCTGTAGAA TTTGAGACAG TTGAATCTGA AGGTGTCAAA 
GTTGCAATTA TTCACTTGGA AAACGGTCGT GTTGAATTAA TGCAACCAAC AAATGATAAC 
AGTCCAATTA AAAAATTCTT GGAGAAAAAA GGCCAAGGAC TACATCACAT GGCACTTGAA 
ACTGACAATA TTGAGGGTGA AGTTGAAAGA ATGGAAGGCT GTGGAGTTCA ATTTCTAGGA 
CAAATTAGAC CTGGTTCTGC AGGAACTAAA GTTACCTTTA TTCATCCAAA ATCCCTTCAT 
GGTGTCTTGG CTGAACTTTG TGCTCATCCA AAATAA 

 

Protein sequence

MKIDHIAIAV NDVEESAKVY QQALGVDSVE FETVESEGVK VAIIHLENGR VELMQPTNDN 
SPIKKFLEKK GQGLHHMALE TDNIEGEVER MEGCGVQFLG QIRPGSAGTK VTFIHPKSLH 
GVLAELCAHP K