Gene Nmar_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0942 
Symbol 
ID5772970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp821297 
End bp821575 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content34% 
IMG OID641316581 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001582276 
Protein GI161528450 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.149034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACA AAATCAAATG TTCACACATC CTTGTTTCAA AACAAAGTGA AGCACTTGCA 
ATAATGGAGA AATTAAAGAG TGGAGAAAAA TTTGGAAAAT TGGCAAAAGA ACTTTCCATT
GATTCAGGAA GTGCCAAAAA AAATGGAAAT CTAGGATATT TTACAAAAGG CATGATGGTT
AAGCCCTTTG AAGATGCAGC ATTCAAGTTA CAAGTTGGAG AGGTATCTGA GCCAATAAAA
TCAGAGTTCG GATATCATAT TATCAAGAGA TTCGGATAA
 
Protein sequence
MSNKIKCSHI LVSKQSEALA IMEKLKSGEK FGKLAKELSI DSGSAKKNGN LGYFTKGMMV 
KPFEDAAFKL QVGEVSEPIK SEFGYHIIKR FG