Gene Nmar_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0941 
Symbol 
ID5773874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp820570 
End bp820974 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content32% 
IMG OID641316580 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001582275 
Protein GI161528449 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.150544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAGAAT TTAGTGAAAA AGAAACAGAG TTTCTCAATT CATTAGAGGA GGCTAGAATA 
GCAACATCAC ATGAAGACAT TCCACATGTA AAGCCAGTAT CTTTTGTATT ATACAAAAAT
GCAATTATTG TTGCAACAGA TTATGAAACA AGAACGTACA AGAATCTAAA AACAAATCCA
AACACAAGTG TAACAATTGA CATTTACAAA TCAGGAGGAC ACAAGGCAAT AGTAATCCAA
GGACAGACAG AGATTATAGA AAACGGAAAA GAATTTCAAA AATTTTATGA AATATTCCAT
GAAAAATTTG AATGGGTTCG ACGAGATCCT TGGAAAGAAA ATGAAGCACC ATTTCTAAAA
ATTATCCCCA GTAACAAAAG CAGTTGGGGT CTAAACACAA AATAA
 
Protein sequence
MIEFSEKETE FLNSLEEARI ATSHEDIPHV KPVSFVLYKN AIIVATDYET RTYKNLKTNP 
NTSVTIDIYK SGGHKAIVIQ GQTEIIENGK EFQKFYEIFH EKFEWVRRDP WKENEAPFLK
IIPSNKSSWG LNTK