Gene Nmar_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0939 
Symbol 
ID5774131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp819822 
End bp820223 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content32% 
IMG OID641316578 
Producthypothetical protein 
Protein accessionYP_001582273 
Protein GI161528447 
COG category[S] Function unknown 
COG ID[COG4911] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.202147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCAT TTTTTACTAC AAATGAAGCA AATGAAGCAC TTCCTGATGT GATAAAAAAA 
TACGAATATG CTTTGGCAAA ACAAAATGAA GTAAAAAAAC TTGAACAGCA ATTACAAATG
AGTGTGTCTA CAACTAATTC CTTTGAAGAA TATGTGACTT TAAAACAACA ACTAAACTCT
GCAATCACCA AATTTTATGA GGCAGTTGAA ATTCTTGAGA GTACTGGAGT TGTTGTAAAA
AGTATAGAAC AAGGATTGCT AGATTTTCCT TCCAAACGAT TTGATGATGA AGTTTGGTTG
TGCTGGAAGT ATGGTGAAAC AGAAATAAAA TTCTGGCATG AAAAAGACTC TGGATTTATG
GGTAGAAAAC CTATTGAAGT AAGTGATGAA TCTCTAGTCT GA
 
Protein sequence
MFSFFTTNEA NEALPDVIKK YEYALAKQNE VKKLEQQLQM SVSTTNSFEE YVTLKQQLNS 
AITKFYEAVE ILESTGVVVK SIEQGLLDFP SKRFDDEVWL CWKYGETEIK FWHEKDSGFM
GRKPIEVSDE SLV