Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0925 |
Symbol | |
ID | 5773437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 809190 |
End bp | 810065 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316564 |
Product | putative agmatinase |
Protein accession | YP_001582259 |
Protein GI | 161528433 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | [TIGR01230] agmatinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTTC TTGATTTATA CATGAACAAA AATCCCATGA TTACTGCCTC AGACGATGAT TCTGAACCTG TAGCAACCGT TTTTGGAATT CCTTTTGATG CAACCCATTC ATACAAACCT GGTTGTAGAT TTGGTCCTGA TGCAATTAGA GATTCTTTTA ACAATATTGA GATATTTCAT CCTGAACTCT CTATAGATTT AGAAACTGTA CACATTGAGG ATTTGGGTAA TACTCGTCAC ACAGTTGTAG CATCTGAGAT GATTGACATG GTAAAAAAAA TTACAACTGA ACTTGTTGCA AAACAAAGAC AGTTGTTCAT TTTGGGAGGT GAACACTCTA TCACATATGG AACGTACACT AGTTTTCCAA AAGATACTGG TTATGTTGTA TTTGACGCCC ACTATGACTT GAGAGATGAA TTTGCAGATA TCAAACTCAG TCATGCATCT TATCTTAGAC GCGTTGTTGA AGAACGAGGT GCAGAAAACA TTCTACATGT TGGAGCTCGT GCATTTGTTA AAGAAGAATT GGAATTTCTA ACTGAACATA AAATCAAAAC CATTTCTGAC AAAGAAATTC GTGACGGAAA AGGCCCCCAG TTACTAAAAG ATCATGTTTC AACTTTTGAT ACAATGTATT CTAGTTTTGA TCTTGATGTT CTTGATCCTG CATTTGCACC TGGTGTTGGA AATCCTGAAG CTGTAGGAAT AACTTCTAGA GAATTATTTG ATATGATTTA CTCTCTTCAA GAAACCAAAG TTATTGGTGC TGATATAGTT GAACTAAACC CTTACCATGA TAATGGTGCC ACTGCATCTC TTGCAGCAAA GATAATGTCC ACGCTTATTG CAATTAATCT ATCTCAAAAT CAATAA
|
Protein sequence | MSFLDLYMNK NPMITASDDD SEPVATVFGI PFDATHSYKP GCRFGPDAIR DSFNNIEIFH PELSIDLETV HIEDLGNTRH TVVASEMIDM VKKITTELVA KQRQLFILGG EHSITYGTYT SFPKDTGYVV FDAHYDLRDE FADIKLSHAS YLRRVVEERG AENILHVGAR AFVKEELEFL TEHKIKTISD KEIRDGKGPQ LLKDHVSTFD TMYSSFDLDV LDPAFAPGVG NPEAVGITSR ELFDMIYSLQ ETKVIGADIV ELNPYHDNGA TASLAAKIMS TLIAINLSQN Q
|
| |