Gene Nmar_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0925 
Symbol 
ID5773437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp809190 
End bp810065 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content36% 
IMG OID641316564 
Productputative agmatinase 
Protein accessionYP_001582259 
Protein GI161528433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC TTGATTTATA CATGAACAAA AATCCCATGA TTACTGCCTC AGACGATGAT 
TCTGAACCTG TAGCAACCGT TTTTGGAATT CCTTTTGATG CAACCCATTC ATACAAACCT
GGTTGTAGAT TTGGTCCTGA TGCAATTAGA GATTCTTTTA ACAATATTGA GATATTTCAT
CCTGAACTCT CTATAGATTT AGAAACTGTA CACATTGAGG ATTTGGGTAA TACTCGTCAC
ACAGTTGTAG CATCTGAGAT GATTGACATG GTAAAAAAAA TTACAACTGA ACTTGTTGCA
AAACAAAGAC AGTTGTTCAT TTTGGGAGGT GAACACTCTA TCACATATGG AACGTACACT
AGTTTTCCAA AAGATACTGG TTATGTTGTA TTTGACGCCC ACTATGACTT GAGAGATGAA
TTTGCAGATA TCAAACTCAG TCATGCATCT TATCTTAGAC GCGTTGTTGA AGAACGAGGT
GCAGAAAACA TTCTACATGT TGGAGCTCGT GCATTTGTTA AAGAAGAATT GGAATTTCTA
ACTGAACATA AAATCAAAAC CATTTCTGAC AAAGAAATTC GTGACGGAAA AGGCCCCCAG
TTACTAAAAG ATCATGTTTC AACTTTTGAT ACAATGTATT CTAGTTTTGA TCTTGATGTT
CTTGATCCTG CATTTGCACC TGGTGTTGGA AATCCTGAAG CTGTAGGAAT AACTTCTAGA
GAATTATTTG ATATGATTTA CTCTCTTCAA GAAACCAAAG TTATTGGTGC TGATATAGTT
GAACTAAACC CTTACCATGA TAATGGTGCC ACTGCATCTC TTGCAGCAAA GATAATGTCC
ACGCTTATTG CAATTAATCT ATCTCAAAAT CAATAA
 
Protein sequence
MSFLDLYMNK NPMITASDDD SEPVATVFGI PFDATHSYKP GCRFGPDAIR DSFNNIEIFH 
PELSIDLETV HIEDLGNTRH TVVASEMIDM VKKITTELVA KQRQLFILGG EHSITYGTYT
SFPKDTGYVV FDAHYDLRDE FADIKLSHAS YLRRVVEERG AENILHVGAR AFVKEELEFL
TEHKIKTISD KEIRDGKGPQ LLKDHVSTFD TMYSSFDLDV LDPAFAPGVG NPEAVGITSR
ELFDMIYSLQ ETKVIGADIV ELNPYHDNGA TASLAAKIMS TLIAINLSQN Q