| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0918 |
|---|
| Symbol | |
|---|
| ID | 5774640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 802019 |
|---|
| End bp | 802861 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641316557 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582252 |
|---|
| Protein GI | 161528426 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3794] Plastocyanin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATG CACTTGCAGT TTTACCTCTA ATGGCAATAT TGATGGTCGG TTCAGGTTTT
GCCTTTGCTG AAAGCTATGA AATTAAAATT CCTTCAGGTG CATCTGATGA AAACTTTCCT
TACTTTTGGT CTCAAAAAGA CACTGGTGAG ACATCTGGTA TAATCACTAT TTTTCCAGGA
GATACTATCA CATGGTCTAA TGCTGATACT GCATTTCACA CTATAACCTC AATCAATCCT
ACAGGGGAAC GAACACCTAC ACCTGATGAT GAAAATGGAC TATTTGATAG TGGATTTTTC
ACTGCAGGAA AATCTTTCAC TCATCAGTTT GATGAACTTG GTGATTTTTA CTATTATTGC
ACACTTCATC CTTGGATGAA TGGTGTAGTT CATGTTGTTT TGGATCCTGG CAGTGTTAAA
TCCATTGATG GAATAGCATC TGGTTATACT GATGATGGGT TAGGATTTGA AGTAAAATAT
TTCCTAGATG CACATTTGGC TCCTGCAGTA CACGTTAATC CTGATGAGAA AACTTTGACA
TTTACTTTAA CAGGGGAGAG TAACAATGAA CATCTTACCA TAACTCTGCC AAAGGAACTA
ATTGACAATC CTACATCTGT TTGGGTTGAT GGAAATATGG TAGAGTTTGA ATCTGATTCT
ACAATTAGTG GTAATACTGC AACTCAACTA GTCATCCCAC TTGATAATAC TTCAAGAGAA
GTCAAGATAA TGGGTTCTAA AGTAATTCCT GAATTTGGAG GAATTGCCTT GTTGGTTCTC
ACAATCTCTA TAATCTCAGT CATCATCTTT TCAAAAAAGA CTAGTTTGAT TGCTCTAAGA
TGA
|
|---|
| Protein sequence | MKYALAVLPL MAILMVGSGF AFAESYEIKI PSGASDENFP YFWSQKDTGE TSGIITIFPG
DTITWSNADT AFHTITSINP TGERTPTPDD ENGLFDSGFF TAGKSFTHQF DELGDFYYYC
TLHPWMNGVV HVVLDPGSVK SIDGIASGYT DDGLGFEVKY FLDAHLAPAV HVNPDEKTLT
FTLTGESNNE HLTITLPKEL IDNPTSVWVD GNMVEFESDS TISGNTATQL VIPLDNTSRE
VKIMGSKVIP EFGGIALLVL TISIISVIIF SKKTSLIALR
|
|---|
| |