| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0916 |
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| Symbol | |
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| ID | 5774469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 799884 |
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| End bp | 800690 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641316555 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001582250 |
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| Protein GI | 161528424 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGA TTAAAGAAAA GTTTGCAGAA TTGCAAACAA GAAAAGAAAA GGCCCTAATT
TCATATATTA TGGCAGGTTT TCCAAATGAA AAATCAACAA TGTCAGTTGT TAGAGGATTA
GTAAAGGGAG GAGTAGATAT TATCGAGTTG GGATTTCCAT TCTCTGATCC TCTTGCAGAT
GGGCCAGTTA TTCAAAATGC AAGCACGATA TCCCTTGAGA AAGGCACAAA AATAGACAAA
TTTTTTGCGC TAGTAAAAAA AATCAGAAAG GAGACAGATA TTCCTCTAGT ACTCATGACA
TACACCAATA TCCTATACCA CAAAGGATAT TCAAAATTCA TAGCAGAGGC AAAAAAATCA
GGAATTGATG GATTTATTCT ACCAGATATG TCCATAGAAG AATCAAAAGA TTATCTTAAA
GCTGCAAGAA AAAATGCAGA CACAATATTT CTAATATCCC CCAATACCAA TAAAACAAGA
ATTCAAAAGA TTGCCAAAGC ATCTTCAGGA TTTTTGTACC TTGTTGCAGT TTATGGAACT
ACAGGAGTAA AAACAGGAAT TAAAAATTAC ACTATAGATG CTATCAAAAA TGTCAAAAAG
CAAACAAAAG GAAAAATTCC AGTTGGTGTA GGGTTTGGAG TTTCAACACC TGATGATGTA
AAAAAATACA TCAAAGCAGG AGCAGATGGA GTAATTGTAG GTAGTGCTTT TTTGAAATTA
ATTGAGAAAA CTCCTCAAAA CAAACTAGAG TCAAAAATAG CATCATTTAC AAAATCACTA
AAAAAACAGA CATTGCAGAA AAAATAA
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| Protein sequence | MSKIKEKFAE LQTRKEKALI SYIMAGFPNE KSTMSVVRGL VKGGVDIIEL GFPFSDPLAD
GPVIQNASTI SLEKGTKIDK FFALVKKIRK ETDIPLVLMT YTNILYHKGY SKFIAEAKKS
GIDGFILPDM SIEESKDYLK AARKNADTIF LISPNTNKTR IQKIAKASSG FLYLVAVYGT
TGVKTGIKNY TIDAIKNVKK QTKGKIPVGV GFGVSTPDDV KKYIKAGADG VIVGSAFLKL
IEKTPQNKLE SKIASFTKSL KKQTLQKK
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