| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0886 |
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| Symbol | |
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| ID | 5774374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 776452 |
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| End bp | 778128 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316525 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001582220 |
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| Protein GI | 161528394 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAA TCTCTAGTAG AAATGTTGTA GAAGGTACTT CTCGTGCTCC ACAAAGAGCA
ATGTACAAAG CTATGGGATT AGATGATAGT GATTTATCAA AACAAATGAT TGGAGTTTGT
CATACAGGAA ATGAAGCAAC TCCATGTAAC ATCCATCTTC CAAGATTAGC TCTCAAAGCA
AAAGAAGGAG TTTCAGATAC GGGTGCAACA CCTAGAGAGT TTTCAACAAT TGCAGTAAGT
GACGGAATTG CAATGGGACA TGAAGGAATG AAATCATCAT TAATTTCTCG TGAAGTAATT
GCAGATTCTA TTGAATTAAT GGTAAGAGCA CATCAATACG ATGCACTAGT AGGAATTGCA
GGGTGTGATA AGAGCCTTCC AGGTACAATG ATGGCAATGG CAAGATTGAA TGTTCCATCA
GTGTTTGTGT ATGGGGGAAC TATCATGCCA GGAATGCTTA ATGGAGAAGA ATTAACAGTT
GTAGATGTTT ATGAAGCAGT TGGAGCATAT GATGCAGGAC AGTTATCATT AGAAGGTCTA
AAAAATATTG AAAATACTGC ATGTCCAAAC GAAGGATCCT GTGGAGGAAT GTTTACTGCA
AATACTATGG CATCAATTTC AGAAGCAATT GGTCTTGCAT TACCAGGCAG TGCCAGTCCA
CCTGCAGAAG ATGATAGAAG AGAAAAGATG GTGTATGATA CTGGAGTAGC ATGTGCAAAA
GCACTACAGA TGGATATCAG ACCAAGAGAA GTTCTTACTT TTGAAGCATT TGAGAATGCA
ATTACAATGC TAAACTCTGT TGGAGGTTCA ACAAATGGAA TTTTACATTT GTTAGCACTT
GCAAATGAAG TTGGTATCAA ATTAACATAT GATGATTTTG AAAGAGTTAG AAAAAAGACA
CCCCACATAG CAGACATGAA ACCAGGTGGA AACTATGTTA TGAATTCACT TGATAAAATT
GGAGGAATTC CATTTGTATT AAAGAAACTA CTTGACAAAG GACTCTTAAA TGAAAATTGT
ATTACAATTA CTGGAAAGAC AATCAAAGAA AATTTGAATG CCATGGTCAT GCCACAAACA
GAACAACAAA TAATCAGACC AATGGAGAAC CCACTTCACA ATGTTGGAAC TGCAGTAATT
CTCAAGGGTT CACTTGCACC AGATGGTGCA GTGATAAAGA CTGCGGGAGT AGAAATGACA
AAATTCACAG GAAAGGCTCG TGTCTTTGAT AGAGAAGAAT TAGCATTTGA GGCAGTAAAA
AGAGGCGATA TTGATGAAGG ACATGTTGTA GTAATTAGAT ATGAAGGACC AAAAGGAGGT
CCAGGAATGA GAGAGATGCT TGCAACTACT GCAGCACTCG TAGGTCAGGG ATTAGGCAAG
AAAGTAGCCA TGGTTACTGA TGGAAGATTC TCAGGAGGAA CAAGAGGGTT CATGGTAGGA
CATGTTGCTC CAGAAGCATA TGTCGGTGGA CCAATAGCAC TTGTAAAAGA TGATGATGAA
ATTACAATAG ATACTGAAAC TAACATAATT GATCTTCATG TGTCATCTGA AGAATTAGAA
AATAGAAGAA AACAATGGAG TCCTCCAAAA CCAAATTACA CATCAGGGGC TTTAGCAAAA
TTTGCAACAT TAGTTGGTTC TGCAGCTGAA GGTGCTATTA CAAAACCTAA TCTATAG
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| Protein sequence | MEEISSRNVV EGTSRAPQRA MYKAMGLDDS DLSKQMIGVC HTGNEATPCN IHLPRLALKA
KEGVSDTGAT PREFSTIAVS DGIAMGHEGM KSSLISREVI ADSIELMVRA HQYDALVGIA
GCDKSLPGTM MAMARLNVPS VFVYGGTIMP GMLNGEELTV VDVYEAVGAY DAGQLSLEGL
KNIENTACPN EGSCGGMFTA NTMASISEAI GLALPGSASP PAEDDRREKM VYDTGVACAK
ALQMDIRPRE VLTFEAFENA ITMLNSVGGS TNGILHLLAL ANEVGIKLTY DDFERVRKKT
PHIADMKPGG NYVMNSLDKI GGIPFVLKKL LDKGLLNENC ITITGKTIKE NLNAMVMPQT
EQQIIRPMEN PLHNVGTAVI LKGSLAPDGA VIKTAGVEMT KFTGKARVFD REELAFEAVK
RGDIDEGHVV VIRYEGPKGG PGMREMLATT AALVGQGLGK KVAMVTDGRF SGGTRGFMVG
HVAPEAYVGG PIALVKDDDE ITIDTETNII DLHVSSEELE NRRKQWSPPK PNYTSGALAK
FATLVGSAAE GAITKPNL
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