Gene Nmar_0880 details

Gene Information

• Locus tag: Nmar_0880
• ID: 5774358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 772407
• End bp: 773036
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 641316519
• Product: hypothetical protein
• Protein accession: YP_001582214
• Protein GI: 161528388

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.498671
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAAAAAGA ACATCCAAAC TTTGCAAAAT ATTGTTTCAC GAAAAGGATC AAGTAAAGTT 
CTAACATTTA GTATTCCACA TGTGTTCAAA GCTCTTCAAT TGTTATCAAA TGAAAAGTAT 
GTGAGCAGAT CAACATTAGG AAAAGAGGTT CATCTCGGAG AAGGGGCAGT AAAGACACTG 
ATTTCACACC TAAAAGAAGT AAAAATGATA GAATCAACCA GATCAGGAAA CTACTTGACA 
GAAAAAGGGA AAAAATTCAC ATCACAGTTA CAGAAAATTA TTCCAAAAGA ATGCAAGATT 
GAAAAAAACA ATCTGACTCC AAGTAAAAAC AATCATGCAA TAATTTTGAA AAAATATTCA 
TCTGCAATAA AGACAGGAGT AGAGCAAAGA GATTACGCAA TAATGTATGG CTCATCAGGG 
TGCACTACGT TGACATTCAA AAACAACAAA TTTGTTTTTC CAGGGGAAGA CAAAGATTGT 
TTAAACAAAG ACAAAAAAAC AAGACAGATT CTTTTGGAAA AACTAGAACC TTCTGATGAA 
GACATTATCA TTATTTCATC ATCAAATGAT TCTTTTGTAG CAGAAATTTC AGCAAAAAAT 
TCAGCCCTTT GGACTATTGC TACAAATTAA 

 

Protein sequence

MKKNIQTLQN IVSRKGSSKV LTFSIPHVFK ALQLLSNEKY VSRSTLGKEV HLGEGAVKTL 
ISHLKEVKMI ESTRSGNYLT EKGKKFTSQL QKIIPKECKI EKNNLTPSKN NHAIILKKYS 
SAIKTGVEQR DYAIMYGSSG CTTLTFKNNK FVFPGEDKDC LNKDKKTRQI LLEKLEPSDE 
DIIIISSSND SFVAEISAKN SALWTIATN