Gene Nmar_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0878 
Symbol 
ID5774345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp771370 
End bp772098 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content36% 
IMG OID641316517 
Producthypothetical protein 
Protein accessionYP_001582212 
Protein GI161528386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.312149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT CTCTTTTTAT CATAATTGTA TTAATTTCAG GTGCGTTTGC AGGACTGATT 
CACGGTACTG TTAATTTTGC AATTGTAGAA CCTTATCTTG ATCAAGCAAT AGGAATTGAA 
AATCAAAACT TGTTTGCATC TGGTGAAGAA GAAGACACTC CTGAATTTTG GGTAGAGTAT 
GAAGGATACA GAACTTGGCA GAAAGGTGGA CAAATTCTTG CAGGGGTGAT ATTGGGAACT 
TCGGTCGGTG CATTGTTTGG AATTGTATTT GCACTGTCTA GAAATGCTTT ACCTGGAAAC 
AATGATGTCA AAAAATCATT GATACTAGCA GGTATAATGT GGCTTACACT TTACATCATT 
CCATTTTTGA AATATCCTGC AAATCCTCCT ACCGTTGGAG ATGGTGAAAC TGTCGTATTA 
AGAGCGATTT TGTATCTGTC CTTTATTGCA ATTTCAGGAT TTGGAGCAGT TGGATTTTAT 
CAATTATCAA AGAAGTTCAA GAATAACAAA AAACTTGTTG CGCTCATAGG CTATGGAATT 
TTCATTTCTA CTGTATTTTT CGCAATGCCA GAAAATCCTG ATGAAGTAAC TGCCCCTATG 
GATTTAGTAA ACGAGTTTAG ATTCATGTCT GTTCTTGGTG TGACATCATT TTGGGCATCA 
ATAGGAATTA TTCTTGGTTT GTTCTGGAGA AAACTCTCTC CAGAGCAAGA AACTACTCGC 
TATAACTAA
 
Protein sequence
MKTSLFIIIV LISGAFAGLI HGTVNFAIVE PYLDQAIGIE NQNLFASGEE EDTPEFWVEY 
EGYRTWQKGG QILAGVILGT SVGALFGIVF ALSRNALPGN NDVKKSLILA GIMWLTLYII 
PFLKYPANPP TVGDGETVVL RAILYLSFIA ISGFGAVGFY QLSKKFKNNK KLVALIGYGI 
FISTVFFAMP ENPDEVTAPM DLVNEFRFMS VLGVTSFWAS IGIILGLFWR KLSPEQETTR 
YN