| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0871 |
|---|
| Symbol | |
|---|
| ID | 5774326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 764895 |
|---|
| End bp | 766205 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641316510 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001582205 |
|---|
| Protein GI | 161528379 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0914836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATAGAAA CTGAGCTAGG AACTTTACGT AGATCTCATT ATTCTGATGA AATCAATTCC
TCAATGGATG GCACCCAAGT TACTGTAATG GGATGGGTTC TAACTGTTAG AGGACATGGA
AACATCAGTT TTGCTACAAT TCGTGACAAA AATGGTGATG TTTCTGTTGT TGCAAAGAAA
GGCGATTGTC CTGATGATAT TCGTGAAAAG ATATCCTACC TCAAAGCACA TTCTTCAATT
GCAATTACTG GAAATGTAAA ATCCTCTGAA AAAGCCCCTA GTGGTTATGA GATAGTTCCA
ACTGAACTTC GAGTATTTTC TGAAGTTGAA AAAATTCCTC CCTTTGAGCC TATAGCCAAG
ACTGTCAAAA ATATCGATAC AAGACTAGAG GTAAGACCAA TTGACCTTAG AAGAAAGGTA
CTACAACATA TCTTCAACAC TAGAAGTTTA GTTCTAAAAT CAATTCGCAG TTACTTTAAT
GATCAAAATT TTGTTGAAAT CAATACTCCA AAGATGATTG CAACAGCTAC TGAAGGTGGC
GCTGCATTAT TTCCAATATT TTACTATAAC AAAGAAGCAT TCTTGGCTCA GAGCCCGCAA
TTGTACAAAG AACAATTGAC AATGAGTTTT GAAAAAGTTT TTGAAATTGC TCCAATTTTT
AGAGCAGAAC CATCAAGAAC TAACCGTCAT CTTGCTGAAG CAATATCTAT TGATTTGGAA
GAAGCATTTA TTGATTACAA TGATGTGATG AGTAGGATTG AAGAAATTAT CAAAATTTCA
ATTAAAACAG TAACTGATTA TGCAAAAGAT AATCCTGATG CAGAGTTTAC AATTCCAGAA
ATCCCTGAAA CCATCCCTCA ATATTCTTAT GATGATTTAG TTGATAAAAT GCAAAAGGCT
GGTGCAAAAA CAGAATGGGG TGATGACTTG TATCCATCAA ACCTCAAAAA AATTGGTCTT
GAAGGATTTT ACTTTATCAA AGATTGGCCA TTGGCACCAA AACCCTTCTA TGTAAAAGAC
AGCAAAGCTA ATCCAAAAAT TTCTGAATCC TTTGATTTGA TGTTTGGTGA TTTGGAATTG
TCTTCTGGTA GTACAAGAAT TGAAAAACGA AATGAACTAG CTGAGAGAAT GAAGAATAAA
GGCATGAACA CTGATGCATT TGAGTACCAT CTTGGTGCAT TTGATTATGG AGTTCCTCCT
CACGCCGGAT GTGGTATTGG TCTTGAGAGG CTAATTATGG CCTTGACAGG CACAGAAAAC
ATCCGTGATG TAACATTTTA TCCAAGAGAT GTTGATAGAC TAACACCATA G
|
|---|
| Protein sequence | MIETELGTLR RSHYSDEINS SMDGTQVTVM GWVLTVRGHG NISFATIRDK NGDVSVVAKK
GDCPDDIREK ISYLKAHSSI AITGNVKSSE KAPSGYEIVP TELRVFSEVE KIPPFEPIAK
TVKNIDTRLE VRPIDLRRKV LQHIFNTRSL VLKSIRSYFN DQNFVEINTP KMIATATEGG
AALFPIFYYN KEAFLAQSPQ LYKEQLTMSF EKVFEIAPIF RAEPSRTNRH LAEAISIDLE
EAFIDYNDVM SRIEEIIKIS IKTVTDYAKD NPDAEFTIPE IPETIPQYSY DDLVDKMQKA
GAKTEWGDDL YPSNLKKIGL EGFYFIKDWP LAPKPFYVKD SKANPKISES FDLMFGDLEL
SSGSTRIEKR NELAERMKNK GMNTDAFEYH LGAFDYGVPP HAGCGIGLER LIMALTGTEN
IRDVTFYPRD VDRLTP
|
|---|
| |