Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0849 |
Symbol | |
ID | 5774223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 749201 |
End bp | 750037 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641316487 |
Product | hypothetical protein |
Protein accession | YP_001582183 |
Protein GI | 161528357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000123625 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCGTTTAG GTACACGATC TCCCAATGAA TTCATCAAAC TTTTGAATGA AAAAAATGAT CTTATTCAAA AATCATTTCT TACAAAAATT ACAGACATGA CAAAAATGAT CGATGCCAAA GTCATGTTGG GAGATGCAAC AGTTTCAGAA CAAAAAACCT TTGATCCAAA ACTAGTGATG GATTATTTTC AAAACATTGG TACAAATCTC AAAGATTGGT CAATACAAGA TGTAACAATA TCAAACAATG AAGATCTTAG AAGAATTTTC ATGAAGTTTG AAATCATGGA AGGAAACTAT TTGATTTCAG GACATGTCTC AATACAATTT CATGTTTTGT TATACTACAA ACCAGATCAA AGAGTGATTG ATTGCCAAAA AGAATTATCT GAAATTATTG ACATGACTAA AAACAAAGAA GAAGAGTTAT CAAACAACAG TGATCAATAT GTGTTAGACA AATTAAAAGA AATGGGATAC AAGGATTTTG ATCATCAAAA ACTTTTTGAA GTTTTTTATG AAAATGATGA GTTTCGAGAA AAAATTTTTT CAGAAATTGA AGAACAGTCA GGAGTTGATT TTCAAAAATT ATCTGAAAAA AAGACTCAGT TGTTTAATGA ATTGGATTCA CTTTTAGTTG AAACATATCA GACAACTCCC ACATTAATTG ATGATTCAAA ACTTGTATCT GGTGAAGAGG GTTGTTTGTG TACATTTGAT TTAGAATTTG TGAAAAATAA TACTCGAGAA GGGTTGTTTG ACCCTAGAAA AATGTCTGAA TCTGCAAAAG AAGGTATTGT AAAACGACTA GACGAGTTTG TAACTATAAT TAACTAA
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Protein sequence | MRLGTRSPNE FIKLLNEKND LIQKSFLTKI TDMTKMIDAK VMLGDATVSE QKTFDPKLVM DYFQNIGTNL KDWSIQDVTI SNNEDLRRIF MKFEIMEGNY LISGHVSIQF HVLLYYKPDQ RVIDCQKELS EIIDMTKNKE EELSNNSDQY VLDKLKEMGY KDFDHQKLFE VFYENDEFRE KIFSEIEEQS GVDFQKLSEK KTQLFNELDS LLVETYQTTP TLIDDSKLVS GEEGCLCTFD LEFVKNNTRE GLFDPRKMSE SAKEGIVKRL DEFVTIIN
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