| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0836 |
|---|
| Symbol | |
|---|
| ID | 5774163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 739036 |
|---|
| End bp | 739842 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641316474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582170 |
|---|
| Protein GI | 161528344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000351202 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTGT CTGAAGTAAA CAAAGATGAA GAAGCCCAAT TACAATGGGA AAAGGAAGCA
AAAAGGATTC AGCAAATTAA AAATCCTACT GAACCAGTTG TAGAACCTAC TCCAGAACCT
GAACCAGTTG TAGAACCTAC TCCAGAACCT GAACCAGTTG TAGAACCTAC TCCAGAACCT
GAACCAGTTG TAGAACCTAC TCCAGAACCT GAACCAGTTG TAGAACCTAC TCCAGAACCT
GAACCAGTTG TAGAACCTAC TCCAGAACCT GAACCAGTTG TAGAACCTAC TCCAGAACCT
GAACCAGTTG TAGAACCTAC TCCAGAACCT GAAGAATCAC AATTACCTGA AATTAGTATC
AAAACAAGTT ATGATGAAAC TCCATCAACA GAATTTAATT CTGCAGCATT ATTAGAAACA
GCATCTGATG AAGAAGTAAA TTCCAGAATT ACTTTTGAAG AATTTACAGA TGAAAAGACT
CTGATCAGCC ATGATGCATT TGGAAATAAA CAAATGAAAA TCAAAGTGTT AGAAGTATCA
GATGAAAACC CTCCAATGAA ATGGAAATTT GGAGATAGAG TAAAAGTAAC TAAAATTCTT
GTAACCATAA AACATCTAGC AACACAAGAG GTAGAAGAAG GAGAATTTGA TGTAGAAGCA
ATTGAAAGAG AATTGCAAGA AAAGAGACAT TATACATCAA CAAACAGATG GATCCCTGCA
GAAGACATCA AAAATGGGTA TGTAGTAGGT TCAAAACATA CTAGATTAAT CAGTGATGCC
TCAGCATTAG ATTACATAGT ATTCTAA
|
|---|
| Protein sequence | MVLSEVNKDE EAQLQWEKEA KRIQQIKNPT EPVVEPTPEP EPVVEPTPEP EPVVEPTPEP
EPVVEPTPEP EPVVEPTPEP EPVVEPTPEP EPVVEPTPEP EPVVEPTPEP EESQLPEISI
KTSYDETPST EFNSAALLET ASDEEVNSRI TFEEFTDEKT LISHDAFGNK QMKIKVLEVS
DENPPMKWKF GDRVKVTKIL VTIKHLATQE VEEGEFDVEA IERELQEKRH YTSTNRWIPA
EDIKNGYVVG SKHTRLISDA SALDYIVF
|
|---|
| |