Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0825 |
Symbol | |
ID | 5774003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 729208 |
End bp | 730071 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316463 |
Product | band 7 protein |
Protein accession | YP_001582159 |
Protein GI | 161528333 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0292375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAT ACCGTTCTCC ACCAATGAGT GTCAACATGA ATGCAGCCAA AGGTGTTGCA ATTGGAATCA TTATTTTAAT CATAATTGGA GTTGTTGCAT TTGCGTCAGT AAAGATTGTA GATGCAGGTC ATCGTGGCGT TTTGTTACAC TGGAATGCAG TTGATTTGAC ACAACCTCCA CTTGAAGAAG GTCTACATTT TGTAATTCCA TTTCAAGATG AAGTTGTAGA TATTGAAGTT CGTACGCTAA AATATGAAAA AAATACTAGA AGTGCATCTA AAGATCTTCA AACGGTAGAA ACAACTGTTA CTGTAAACTA TCATCCTGAT AAAGAAGCAG TACATAGACT ATACAAGAAT CTCGGATTAG ATTATGAAAA TAGAGTAATT CAACCAGCAA TTGAGGAGAC TGTAAAACAA GTAACTGCAA ATTATAATGC AGAAGAATTA ATCACAAAAA GACCTCTAGT AAAACAAGAC ATCGAATCAT CAATTAGAGA AAGATTAAAT CAATTTGAAG TAGTGACTGA AGTAATTTCT ATTACTGATT TTGAATTCTC CCCATTGTTT GCACAAGCAA TTGAGTCCAA AGTGGAGGCT GAGCAAAAGG CACTCAAAGC AGAAAATGAT TTGCTAAGAA TAGAGGTAGA AGCCAAACAA CGAGAAGCCA ATGCAATAGG TATTGCCAAT GCCAACATTG CAGAAGCAAA AGGTGAGGCC GAAGCAATTG CAATTATCAA CAAAGCCCTT GCTGAAAATC CAAATTATTT AGAATGGCTA AAGACACAAG CTTGGGATGG AAAATTGCCT CTAGTAGTAG GTGAAGGTGG TACACCATTC ATTCAAATCC CGGTTACACC TTAA
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Protein sequence | MSKYRSPPMS VNMNAAKGVA IGIIILIIIG VVAFASVKIV DAGHRGVLLH WNAVDLTQPP LEEGLHFVIP FQDEVVDIEV RTLKYEKNTR SASKDLQTVE TTVTVNYHPD KEAVHRLYKN LGLDYENRVI QPAIEETVKQ VTANYNAEEL ITKRPLVKQD IESSIRERLN QFEVVTEVIS ITDFEFSPLF AQAIESKVEA EQKALKAEND LLRIEVEAKQ REANAIGIAN ANIAEAKGEA EAIAIINKAL AENPNYLEWL KTQAWDGKLP LVVGEGGTPF IQIPVTP
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