Gene Nmar_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0823 
Symbol 
ID5773960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand+ 
Start bp728011 
End bp728697 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content32% 
IMG OID641316461 
Productdethiobiotin synthase 
Protein accessionYP_001582157 
Protein GI161528331 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0599522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA TCTTTGTTGC TGGAACTGAT ACTGATGTCG GTAAAACCTA CATCACTGCA 
GGATTGGCAG TTGCATTACG AAAAATGAAT GTAGATGTTG GTGTGATGAA ACCTTTTGCT 
GCAGGCACTG CTCAAAAAAA AGGTTTCAAA TCAGAAGACG TTGAAATTTT GGCCAAAGCT 
GCACAGGTAG CTGATCCTGA AAATTTGATA AACCCTCAAT TTTTCCCAAT TCCTGCATCT 
CCTTACACTG CTTGGAAAAA TCTAAAAACA AAACCCAAAG TTTCTACTAT TCTATCTAGT 
TTCAAAAAAT TATCAAAACT ACATGAAATG ATTCTTGTAG AAGGAATGGG TGGAATAATG 
ACGCCTATTC TCAAAGACTA TTACATTACA AATTTGATAA AAGAAATGAA AATTCCATCT 
GTAATTGTTA CTAGAAGTAA AGTTGGCACT GTTAATCATA CCATAATGAC AATTCAGATG 
TGTCAGAAAT ACAAAATTCC AATTAAAGGA ATAATCATTA ATGATTTTGA TGATGATGGT 
TATCCTATAA AAAATCTCAA AAGAGATTTG GAGAGTTTAA CAGGAGTCAA AGTTTTGGGT 
TCTATTCCAT TTATCAAAGA TATGAGTAAT GCATCACTAA ATAGAATCTT TAAGAAAAAC 
ATTGATTTGA AATCTTTGTT AAAGTAA
 
Protein sequence
MKSIFVAGTD TDVGKTYITA GLAVALRKMN VDVGVMKPFA AGTAQKKGFK SEDVEILAKA 
AQVADPENLI NPQFFPIPAS PYTAWKNLKT KPKVSTILSS FKKLSKLHEM ILVEGMGGIM 
TPILKDYYIT NLIKEMKIPS VIVTRSKVGT VNHTIMTIQM CQKYKIPIKG IIINDFDDDG 
YPIKNLKRDL ESLTGVKVLG SIPFIKDMSN ASLNRIFKKN IDLKSLLK