| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0818 |
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| Symbol | |
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| ID | 5773907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 722323 |
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| End bp | 723057 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641316456 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_001582152 |
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| Protein GI | 161528326 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0785] Cytochrome c biogenesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.20883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAA TAACTCTGGC AATTGCAGCT CTTGCTGGAC TTGGATCGTT TGTAGCTCCT
TGTATTTTAC CCATGATTCC AGCATTTCTT GCATATATTT CTGGAACTAC ACTTTCAGAA
TTAAATCAAA ATGGAAATCA AACTACAAAA GTAATCAGTA GATCAAATAT CATTTTCAAT
ACAATTTTCT TTGTGTTAGG ATTTACAACA GTATTTGCAA TTTACAGTGT AATAATTAAC
AGTATTTTTT CAAATGTGGG TGAAGAATTT ACATCCACAT TCAACATGAT AGGAGGAACA
ATAATTATTT CATTTGGAGT GTTTTTGATG CTTTCAATAA AAATCAGAAA ATTGAACGTA
GAGAGAAAAA TTATTCCAAA AGGAATGAAA GTTAGTTATC CATTTTCATT TATTTTTGGA
TTAGCATTTG CAGCTGCATG GACTCCTTGT GTCGGTCCAG TATTAGGGAC AATTTTGACT
TTAGCAGCAG CAACTCCAGC TCATGCACTA AACATAATGT TGATGTATTC TCTAGGATTA
GGAATTCCAT TTATTCTGAT GGGAGTGTTT CTTTCAAGAG GAACAAGACT CATTAAAAAA
ATGAATAAAC ATCTAAAATA TTATAACATA ATTTTAGGAG GATTCATTAT TGTGTTAGGA
GTTTTAGTTT TTACAAATCA ATTAGCATAT ATTGCAAACT TTCCTCTTCT CAACGAACTG
GTGTTACTAG GGTGA
|
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| Protein sequence | MAEITLAIAA LAGLGSFVAP CILPMIPAFL AYISGTTLSE LNQNGNQTTK VISRSNIIFN
TIFFVLGFTT VFAIYSVIIN SIFSNVGEEF TSTFNMIGGT IIISFGVFLM LSIKIRKLNV
ERKIIPKGMK VSYPFSFIFG LAFAAAWTPC VGPVLGTILT LAAATPAHAL NIMLMYSLGL
GIPFILMGVF LSRGTRLIKK MNKHLKYYNI ILGGFIIVLG VLVFTNQLAY IANFPLLNEL
VLLG
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