| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0811 |
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| Symbol | |
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| ID | 5773849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 716385 |
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| End bp | 717122 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316449 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001582145 |
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| Protein GI | 161528319 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.482336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCCTG CACAACAAGG TTACGATAGA GCAATTACAG TGTTCTCACC AGACGGCAGA
TTATACCAAG TCGAATATGC AATTGAGACT GTAAGAAGAG GAACAATTGC AGTAGGTGTA
AAGTGTAAAG ATGGTATCGT AATTGCAGTT GAAGAAAAAC CAAGAAAATT ACAAATTTCT
AAAACAGCAC AAAAGATTTT CCAAATTGAT GATCATGTTG GAGTTGCTGC AGCAGGATAC
ATTCCAGATG CAAGAAGTCA AGTTGACAAT GCACGATTCT TTTCTCAAAG TAACAAAATG
ATTTACGATG AACCAGTAGA AGTTGAAACA ATTGCTAAAC ACTTAGCTGA TCAATCTCAA
CAATATACCC AATATGCAGG TGTAAGACCA TTTGGTGTTG CACTAATTCT TGGAGGAGTT
GTTGGAGGTA AGCCACAATT GTATTTGACT GACCCAAGTG GAACATACAT CTCATATGAT
GCAATTGCAA TTGGTTCAGG TTCTGATGAA GTAACTGACT TTTTAGAAAA AACATACAAG
AATGATCTTT CATTAGATGA TGCATCTGCA TTAGCAGCTG CAGGAATTTA TCTATCAAGT
GAAGACAAAG ATGGAACTGG TCATATCAGA ATGGCACATA TCAAAACAGA TAGCGGGTTG
TATGAAATAG TTTCAGAAGA GCAGGTTGCA AATTATGCAA ATGCTGCAAA ACAAAACTAT
CCACACGACA AGAACTAA
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| Protein sequence | MLPAQQGYDR AITVFSPDGR LYQVEYAIET VRRGTIAVGV KCKDGIVIAV EEKPRKLQIS
KTAQKIFQID DHVGVAAAGY IPDARSQVDN ARFFSQSNKM IYDEPVEVET IAKHLADQSQ
QYTQYAGVRP FGVALILGGV VGGKPQLYLT DPSGTYISYD AIAIGSGSDE VTDFLEKTYK
NDLSLDDASA LAAAGIYLSS EDKDGTGHIR MAHIKTDSGL YEIVSEEQVA NYANAAKQNY
PHDKN
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