Gene Nmar_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0778 
Symbol 
ID5773645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp695334 
End bp695756 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content32% 
IMG OID641316415 
Productsignal transduction protein 
Protein accessionYP_001582112 
Protein GI161528286 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0404956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATG TACGAGACAT CATGCAAAAA AATGTCATAA CTATTGAATA TGATAAAACA 
GCACATGATG CAGCAAGTAT TCTAAAAGAA AAAGAGATCA GTTTTTTGGT AATAATTAAA
GATGAAAAGC CAATAGGAGT TATTTCAGAA AGAGACATTG TTCAAAAAGT AACAGCTGAA
GATCAAAAAG CATCATCAGT TTTAATTGAA GATATCATGT CAAAGAAATT TCGATGGGTC
AGTCCAGACA CACCAATTGA AGACGCTGTT CAAAAGATGT TAAATAACAA TATTCGCAGA
CTAATCATTC TTGAAGATGA AAAACTAGTA GGAGTCATCA CTCAAACAAA TTTGGCAGAG
TTTTTACGCA GTAAACTCTT GATTAATGGA ATGTTAGATA ACATAGATTC TGAAAAATCC
TAG
 
Protein sequence
MAHVRDIMQK NVITIEYDKT AHDAASILKE KEISFLVIIK DEKPIGVISE RDIVQKVTAE 
DQKASSVLIE DIMSKKFRWV SPDTPIEDAV QKMLNNNIRR LIILEDEKLV GVITQTNLAE
FLRSKLLING MLDNIDSEKS