Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0772 |
Symbol | |
ID | 5773591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 692293 |
End bp | 692721 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641316409 |
Product | hypothetical protein |
Protein accession | YP_001582106 |
Protein GI | 161528280 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00837821 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCCACAAT TCTCTTTTGA AAAAACCAGT ACTGCTAGTA GAGATGCTGT CTATAGAGTT TTTTCAGATT ATGAGAACTA TCAAAGAACA TCTCCAGAGT TTTTTCCATC AATTCGAATT CGTTCTGTTA GAAATAACGT TGCAGTAGTT GAAGAGCATA TGAATTTGGG AGATGAAGAG TTTGTAATCA TGGCAAAACA CGTTACTGAT GAGCCAGTAC TACATGATGT TTATGTCATT GGGGGTGATG CAAAGGGCTC TCACATTCAA GAACAATTCA TTGAAACTCC TGAAGGGACA AAAATACTAG TTGATGTTGA TTTGAAATTA AAGGGAAAGA TGAAACTTGG TGGAATGTTT TCAAAAAATC GATATCAAGA AAATTATGAA GAGATTTTAG ATAATTTTAT CAAAATTGCT GAAAATTAA
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Protein sequence | MPQFSFEKTS TASRDAVYRV FSDYENYQRT SPEFFPSIRI RSVRNNVAVV EEHMNLGDEE FVIMAKHVTD EPVLHDVYVI GGDAKGSHIQ EQFIETPEGT KILVDVDLKL KGKMKLGGMF SKNRYQENYE EILDNFIKIA EN
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