Gene Nmar_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0770 
Symbol 
ID5773577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp690338 
End bp691429 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content35% 
IMG OID641316407 
Product5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase-like protein 
Protein accessionYP_001582104 
Protein GI161528278 
COG category[R] General function prediction only 
COG ID[COG1759] ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0184752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAAGA GTTCTGAGAT CAAGAAAATT GTTAACGAGT ACTCAGATGT GAGAATAGGC 
GTTCTTGGGA GCCACTCTGC ACTTGAGATT ATGGATGGTG CAAAAGATGA GGATTTTCAG
ACCAGAGTAT TTTGTCAAAA AGGTAGAGAA GGACCATACC AGAGATTCAA CAGAATTGCT
GACGAGATTA CAGTATTAAA CAAATTCAAG GATATGGCTT CAGCCAAAAT TCAAAAAGAA
TTAAGAGAAT CAAATACAAT TATTGTTCCA CATCGCTCCC TTACAGTCTA TCTAGGTTAC
AAGACAATTG AAAATTCCTT CAAAGTACCA ATTTTTGGAA ATAGAAAGTT GTTCCAAGCT
GAAGAAAGAA CTGCAAAGAA AGGACAATAC TATCTTTTAG AAAAAGCCAG AATAAAGTAT
CCAAAATTAT TCAAAGACCC TAAAAGAATC AACAAACCAT GTATCGTCAA AGTACAAGAA
AAAAACAGAC CATTAGAAAG AGCATTTTTC ACAGTATCAT CTTACAAAGA TTATGTTAAG
ACATCTGAAG AGAAAATCAA ACAAGGAGTA ATTGCAAGAA AAGATCTAGA AAAAGCAAGT
ATTGAAGAAT TGGCAATTGG AACATACATG AATTTTAATT TCTTCCACAC TCCAATTTCA
GACCAAGTTG ACTTTATTGG AATTGAGAGA AGGCTTCAAA CAAACCTCAT GGACTTTAAT
GCATTACCTG CAAAACAACA ACTTGACATT GATGTAGATT TGCAAAATAT TGAGGTAGGC
CATACACCTG CAAGTATTAG AGAGTCATTA CTAGAAAAAG TACTCAAAAT GGGAGACAAG
TTTGTCAATG CAGTAAAAAG AGAATACGCT CCAGGAATTA TTGGTCCATT CTCACTTCAA
AGTGTAATCA CAAAAGATTT GGAATTAATC GTATATGATG TATCATTACG TGTTCCAGGA
AATCCAATTG TTGCAACAAC TAGTCCATAT ACAAAATACC AATACGGACA AACATTCGGA
GTTGGCAGAA GAATTGCCAT GGAAATCAAA CGAGCTCAAG AAGAAGACAG ACTAGATGAG
ATAGTTACAT AG
 
Protein sequence
MIKSSEIKKI VNEYSDVRIG VLGSHSALEI MDGAKDEDFQ TRVFCQKGRE GPYQRFNRIA 
DEITVLNKFK DMASAKIQKE LRESNTIIVP HRSLTVYLGY KTIENSFKVP IFGNRKLFQA
EERTAKKGQY YLLEKARIKY PKLFKDPKRI NKPCIVKVQE KNRPLERAFF TVSSYKDYVK
TSEEKIKQGV IARKDLEKAS IEELAIGTYM NFNFFHTPIS DQVDFIGIER RLQTNLMDFN
ALPAKQQLDI DVDLQNIEVG HTPASIRESL LEKVLKMGDK FVNAVKREYA PGIIGPFSLQ
SVITKDLELI VYDVSLRVPG NPIVATTSPY TKYQYGQTFG VGRRIAMEIK RAQEEDRLDE
IVT