Gene Nmar_0729 details

Gene Information

• Locus tag: Nmar_0729
• ID: 5774304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 662927
• End bp: 663550
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641316366
• Product: superoxide dismutase
• Protein accession: YP_001582063
• Protein GI: 161528237
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 35
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTTCAAT ACGAACTTCC AAGATTGCCT TATGGATATG ATGAATTGGA ACCTTACATT 
GATACTGAAA CAATGAAAAT TCACCATCAA AAACACCATC AGTCGTATGT TGATGGACTA 
AACAAATCTC TTATAGAAAT TGGATCTGCA TCTCACCCTC AATACATCAC ATCAATATTG 
TCTGATCTAA AAGCCATACC TGAGTCTGGT AGAAACAAAA TCAATTTCTT TGGTGGAGGC 
TTTGAAAATC ACAGATTATT TTGGGAAATA ATGACTCCTA ATGGTGATGG TTCCCCTGGT 
GGAAAGATTG AGGATGCAAT TGATGTTTAT TTTGATAGTT TTGATAACTT TAAAGAGATT 
TTTTCTAACA CTGCAATTGG AATTCAGGGT AGTGGATGGT GTTGGTTGGT TTTTAATTCA 
ACATACAGCA AAATAGAAAT TCTTTCTACT GAAAATCAAA CCAGTCCTTG GACATTACAA 
AAAATACCTT TACTGGGATT GGATGTTTGG GAACATGCTT ACTATCTAAA ATATCAAAAT 
CGTAGACCTG ATTATGTTAA AGAATGGTGG AATATTGTTA ATTGGGATTA TGTTGAAAAT 
CGTTTTTCAG AACTTGTAGG TTGA 

 

Protein sequence

MVQYELPRLP YGYDELEPYI DTETMKIHHQ KHHQSYVDGL NKSLIEIGSA SHPQYITSIL 
SDLKAIPESG RNKINFFGGG FENHRLFWEI MTPNGDGSPG GKIEDAIDVY FDSFDNFKEI 
FSNTAIGIQG SGWCWLVFNS TYSKIEILST ENQTSPWTLQ KIPLLGLDVW EHAYYLKYQN 
RRPDYVKEWW NIVNWDYVEN RFSELVG