Gene Nmar_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0726 
Symbol 
ID5773159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp659913 
End bp661637 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content34% 
IMG OID641316363 
ProductSNF2-related protein 
Protein accessionYP_001582060 
Protein GI161528234 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAT CCATGGAAAA CATCGGAACA TTGGAGTATG TTCTTGACAA ATACTCAAAA 
ATCTGGTGCT GGAAGATAAC TGGTGAGCGT GCTGTAAGCA TGATCTCTAG ATTGGTGCCT
GAGGCTTGGT ATGGGGAAAA TGTCAACGAA GTGATTATTC CTGATAGTAC TGAAAGTGTA
AAACAAATCA AACTGATCCT TGATAGGTAT CCTCTTGATA TTTTATCAAA AACCACTTGG
CAAAGAAAAA TCGTCAAAAC CTATGCTCCC AAACCTACTT TGCCTCCAGT AAAACACAAA
CTAAAACGAG CAAAAACAGG AGACCAATTT AGAGGAAAAT TACTAAACTT CCAAAAAGAA
GGTTTAGATT TCTTAATGAA ATCCTCTGGT AATGCATTAT TAGCTGATGA AATGGGTCTT
GGAAAAACAG TACAAACATT ATCTTATGTT GCAACTGAGA AACAAACATT TCCCGTTTTA
GTTGTTGCAC CATTAGTTAC ATTAAACAAT TGGGAACGAG AAATTGAAAA ATTTCTTAAG
AAAAAAAGCC GAAATGGAAG ATTACTTGAA TCTGAATCTC CTACTGTTAC CTTAATTAGA
ACTGGAAAGA AAAAAAAACT TCCTAAAACT GACATTTATG TAATAAATTA TGAATTACTT
TTCAAAAGAT ATGATGATTT GGCAAAAGTT GGAATCAAAA CTGTTGTATG TGATGAAGTC
CATAATTTAA GATCTAAAAC AACTCAAAAA TACAAATCAA TAAAAAAATT AGCTGCATTA
CCATCAGTGT CTTATCGAAT TGGACTTTCC GGAACCCCTA TCTACAACCG TGGTTCTGAA
ATTTGGCCAA TCATTGATAT TTTGAAACCT GGACTCCTTG GAAGTTTCAA AGAATTTTGT
GAATACTTTT GTTATGTAAA TGAAAAGGGT AAGGCAATTG TATTGGAAAA TAAACGTGCA
TCACTTAGAA ACGAACTCCA AAAACATGTT ATGCTTAGAC GCAAAAAATC TGATGTGCTA
AAAGAACTCA AAGATAAAGT ACGCTACAAG GAAGTCATTG CAGCAGACAC TGATTACTAT
GTTGAAGAAT TAGACAAAAT TTGGAAACGC TTAGAAGAAG AGCAAAAAGA GGCTGAATCC
GAATTTTCAA AATCAGCTTC ATATCATAGA GCAATACAGA GTGAAAGACA AATTGCAGGC
TTGGCAAAAC TACCTCATGT TATCAATTTT GTAAAAAATA TCATGGAAAT TGAGGAAAGT
GTTGTAGTTT TTTGTCATCA TAAAGTAATT CACAAATTAC TCCATGAGAG TCTTCAAGAA
TTCTCACCTG TATCGATAAT TGGAGGCCAA TCTGATACCC TGAGACAAGA TCAGATAGAT
AAATTCCAAA AAGGCGAATC AAAATTAATG ATTGCAGGAA TTCGTGCAGG AAATGTAGGA
ATTAATTTAA CTCGAGCAAA ATATGTTATT TTTGCAGAAC TTGATTGGAG TCCTGCAATC
CACAGACAAG CTGAAGATCG TTTGCATAGA ATTGGACAAC AGAATACTGT ATTTGCATAT
TATTTGATTG GTAATGGCAC ACTTGATGAT CATGTTGCAA ATGTTTTGGT AGACAAGAGT
TATGAAATCG ATGAAATTAT GGATGAAAGT GTTGAAACCT TTGAAAATAA AGACAAAGCA
CAACTTATTC TTGCACAAAT TCAAGACAAA ATACGTTCAA AATAA
 
Protein sequence
METSMENIGT LEYVLDKYSK IWCWKITGER AVSMISRLVP EAWYGENVNE VIIPDSTESV 
KQIKLILDRY PLDILSKTTW QRKIVKTYAP KPTLPPVKHK LKRAKTGDQF RGKLLNFQKE
GLDFLMKSSG NALLADEMGL GKTVQTLSYV ATEKQTFPVL VVAPLVTLNN WEREIEKFLK
KKSRNGRLLE SESPTVTLIR TGKKKKLPKT DIYVINYELL FKRYDDLAKV GIKTVVCDEV
HNLRSKTTQK YKSIKKLAAL PSVSYRIGLS GTPIYNRGSE IWPIIDILKP GLLGSFKEFC
EYFCYVNEKG KAIVLENKRA SLRNELQKHV MLRRKKSDVL KELKDKVRYK EVIAADTDYY
VEELDKIWKR LEEEQKEAES EFSKSASYHR AIQSERQIAG LAKLPHVINF VKNIMEIEES
VVVFCHHKVI HKLLHESLQE FSPVSIIGGQ SDTLRQDQID KFQKGESKLM IAGIRAGNVG
INLTRAKYVI FAELDWSPAI HRQAEDRLHR IGQQNTVFAY YLIGNGTLDD HVANVLVDKS
YEIDEIMDES VETFENKDKA QLILAQIQDK IRSK