Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0726 |
Symbol | |
ID | 5773159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 659913 |
End bp | 661637 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641316363 |
Product | SNF2-related protein |
Protein accession | YP_001582060 |
Protein GI | 161528234 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAT CCATGGAAAA CATCGGAACA TTGGAGTATG TTCTTGACAA ATACTCAAAA ATCTGGTGCT GGAAGATAAC TGGTGAGCGT GCTGTAAGCA TGATCTCTAG ATTGGTGCCT GAGGCTTGGT ATGGGGAAAA TGTCAACGAA GTGATTATTC CTGATAGTAC TGAAAGTGTA AAACAAATCA AACTGATCCT TGATAGGTAT CCTCTTGATA TTTTATCAAA AACCACTTGG CAAAGAAAAA TCGTCAAAAC CTATGCTCCC AAACCTACTT TGCCTCCAGT AAAACACAAA CTAAAACGAG CAAAAACAGG AGACCAATTT AGAGGAAAAT TACTAAACTT CCAAAAAGAA GGTTTAGATT TCTTAATGAA ATCCTCTGGT AATGCATTAT TAGCTGATGA AATGGGTCTT GGAAAAACAG TACAAACATT ATCTTATGTT GCAACTGAGA AACAAACATT TCCCGTTTTA GTTGTTGCAC CATTAGTTAC ATTAAACAAT TGGGAACGAG AAATTGAAAA ATTTCTTAAG AAAAAAAGCC GAAATGGAAG ATTACTTGAA TCTGAATCTC CTACTGTTAC CTTAATTAGA ACTGGAAAGA AAAAAAAACT TCCTAAAACT GACATTTATG TAATAAATTA TGAATTACTT TTCAAAAGAT ATGATGATTT GGCAAAAGTT GGAATCAAAA CTGTTGTATG TGATGAAGTC CATAATTTAA GATCTAAAAC AACTCAAAAA TACAAATCAA TAAAAAAATT AGCTGCATTA CCATCAGTGT CTTATCGAAT TGGACTTTCC GGAACCCCTA TCTACAACCG TGGTTCTGAA ATTTGGCCAA TCATTGATAT TTTGAAACCT GGACTCCTTG GAAGTTTCAA AGAATTTTGT GAATACTTTT GTTATGTAAA TGAAAAGGGT AAGGCAATTG TATTGGAAAA TAAACGTGCA TCACTTAGAA ACGAACTCCA AAAACATGTT ATGCTTAGAC GCAAAAAATC TGATGTGCTA AAAGAACTCA AAGATAAAGT ACGCTACAAG GAAGTCATTG CAGCAGACAC TGATTACTAT GTTGAAGAAT TAGACAAAAT TTGGAAACGC TTAGAAGAAG AGCAAAAAGA GGCTGAATCC GAATTTTCAA AATCAGCTTC ATATCATAGA GCAATACAGA GTGAAAGACA AATTGCAGGC TTGGCAAAAC TACCTCATGT TATCAATTTT GTAAAAAATA TCATGGAAAT TGAGGAAAGT GTTGTAGTTT TTTGTCATCA TAAAGTAATT CACAAATTAC TCCATGAGAG TCTTCAAGAA TTCTCACCTG TATCGATAAT TGGAGGCCAA TCTGATACCC TGAGACAAGA TCAGATAGAT AAATTCCAAA AAGGCGAATC AAAATTAATG ATTGCAGGAA TTCGTGCAGG AAATGTAGGA ATTAATTTAA CTCGAGCAAA ATATGTTATT TTTGCAGAAC TTGATTGGAG TCCTGCAATC CACAGACAAG CTGAAGATCG TTTGCATAGA ATTGGACAAC AGAATACTGT ATTTGCATAT TATTTGATTG GTAATGGCAC ACTTGATGAT CATGTTGCAA ATGTTTTGGT AGACAAGAGT TATGAAATCG ATGAAATTAT GGATGAAAGT GTTGAAACCT TTGAAAATAA AGACAAAGCA CAACTTATTC TTGCACAAAT TCAAGACAAA ATACGTTCAA AATAA
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Protein sequence | METSMENIGT LEYVLDKYSK IWCWKITGER AVSMISRLVP EAWYGENVNE VIIPDSTESV KQIKLILDRY PLDILSKTTW QRKIVKTYAP KPTLPPVKHK LKRAKTGDQF RGKLLNFQKE GLDFLMKSSG NALLADEMGL GKTVQTLSYV ATEKQTFPVL VVAPLVTLNN WEREIEKFLK KKSRNGRLLE SESPTVTLIR TGKKKKLPKT DIYVINYELL FKRYDDLAKV GIKTVVCDEV HNLRSKTTQK YKSIKKLAAL PSVSYRIGLS GTPIYNRGSE IWPIIDILKP GLLGSFKEFC EYFCYVNEKG KAIVLENKRA SLRNELQKHV MLRRKKSDVL KELKDKVRYK EVIAADTDYY VEELDKIWKR LEEEQKEAES EFSKSASYHR AIQSERQIAG LAKLPHVINF VKNIMEIEES VVVFCHHKVI HKLLHESLQE FSPVSIIGGQ SDTLRQDQID KFQKGESKLM IAGIRAGNVG INLTRAKYVI FAELDWSPAI HRQAEDRLHR IGQQNTVFAY YLIGNGTLDD HVANVLVDKS YEIDEIMDES VETFENKDKA QLILAQIQDK IRSK
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