Gene Nmar_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0706 
Symbol 
ID5773125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp645838 
End bp646848 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content30% 
IMG OID641316342 
Productpeptidase M10A and M12B matrixin and adamalysin 
Protein accessionYP_001582040 
Protein GI161528214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCAA ACACCTTTGC AAAAAAGGAC TATATCAATG CCCTAGATGA AATTGAAAAT 
CAACAATTTC AATTACTTCA AAGAAAAGCC AAATTTTTAC AAAATGAATT AACAAAAACT
AGTTCACAAA TTAATGACTT TGAAATTGAT TCATTAAATG ATTTAACACA TGATTCTAGT
TTTAAAAATA ATAAAAAACA TAATCAAAAT TCTTTAAAAC TTAATTTTGA TACAAAAATA
ATTTCAATTA AACATCTCGT GCTTTTTGCA TCATTCGTGT TTTTTTCAAT TATGACTCCA
TTTTTGATTA ATACATATTT TCTACACGAT GATATTGTAG CTGATGCTGT TGTTCTTGAG
TCTCCTATGA AAACAAAATT TTTAATTGAA AATTTACGTG GTGACACAAT TGATACTGTA
AAGTCTTGGA GAATATTAGA TGGTGATGCA TTAAATGTTA ATCTAATTAA TGGAGATATT
TTAACATCTG AACAACACAA TGCTGTATTA AAAGTCATTA ATTCTACAGA CTCTATACTA
ATAGACGATC ATATTATTAA TCGAGGTCCA CCAGGCTCTG AATCTATATA TTTTCTAGGT
TGGGCTGGTG CAATGGAAGA AGCTGCAAAA ACTGATACTG CCTACACAGT CCCTACAACT
TTCAATATCT TTCAATCTGA AAATGGTGAA GGTCAAATCA TAATTAATTT TTCAAATTTG
ATTGATACTG ATGGTTTTAC AGGATACACC AAATCTGTCA TACAAGATGG TGAAATATTA
AAATCATATA TCACAATTTA TGATGTTGAT AACTTGGATG CATCTGAATT AGCAACAATT
GTACGACATG AATTTGGACA TGCTTTGGGA CTAGGTCATT CTACCGATCC AGAAGACCTA
ATGGCTCCTA CAATACTGAC TGAATTTCCT TATATTTCAG AATGCAATGT AGATGCTATG
CGGGTATTGT ATAATGGGCA CGAATCAGGA ATGGCAGTGT GTAAAAAATG A
 
Protein sequence
MVANTFAKKD YINALDEIEN QQFQLLQRKA KFLQNELTKT SSQINDFEID SLNDLTHDSS 
FKNNKKHNQN SLKLNFDTKI ISIKHLVLFA SFVFFSIMTP FLINTYFLHD DIVADAVVLE
SPMKTKFLIE NLRGDTIDTV KSWRILDGDA LNVNLINGDI LTSEQHNAVL KVINSTDSIL
IDDHIINRGP PGSESIYFLG WAGAMEEAAK TDTAYTVPTT FNIFQSENGE GQIIINFSNL
IDTDGFTGYT KSVIQDGEIL KSYITIYDVD NLDASELATI VRHEFGHALG LGHSTDPEDL
MAPTILTEFP YISECNVDAM RVLYNGHESG MAVCKK