Gene Nmar_0695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0695 
Symbol 
ID5773420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp635442 
End bp635918 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content32% 
IMG OID641316331 
ProductPUA domain-containing protein 
Protein accessionYP_001582029 
Protein GI161528203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2016] Predicted RNA-binding protein (contains PUA domain) 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCAA ATCTAATTTC AAAGAGTGAG ACATCTGCAC TCTTAAAGAC AGTTTCAGAA 
GAATGGGGAA TTGAATTTCC CAAAATCAAA AATCTCAAAG TACATCAAAT TTTAGATGAT
GCACAAATCA TAACTGGAAA AGGTATCAAG ATTCTAAAAA TCAACGATGA TTATTTACCA
TTTTTATCAG AAACAGAGAC TCTGGAAAAA TTTCCTAGTG TTACAGTAGA CATGGGTGCA
GTCAAATTCA TGTGCAAAGG TGCAAACTTG ATGAGACCAG GGATTAGATC ATTTACAGAA
TTTGAAAAAG ATAAGCTAGT TTGTATTGTT GAAGAATCCC AACACAAATT TTTGGCAGTA
GGAAAATCAG TTGTTTCAAG TGAAGAAGTA GAAAAAATGG ACAAGGGCGA AGTTTTGAAA
AATCTACATT ACATTTCAGA TAAATTCTGG GAAACTGGAA AAACGATTTA CGATTAA
 
Protein sequence
MKSNLISKSE TSALLKTVSE EWGIEFPKIK NLKVHQILDD AQIITGKGIK ILKINDDYLP 
FLSETETLEK FPSVTVDMGA VKFMCKGANL MRPGIRSFTE FEKDKLVCIV EESQHKFLAV
GKSVVSSEEV EKMDKGEVLK NLHYISDKFW ETGKTIYD