| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0692 |
|---|
| Symbol | |
|---|
| ID | 5774603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 632975 |
|---|
| End bp | 634327 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641316328 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_001582026 |
|---|
| Protein GI | 161528200 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTC TAAAACATGT TGATGATCAC ATGGAAGATT TGATTTCAGA TCTTCAGACA
TTAATCAGAC AGCCTAGTGT TTCTGCAAAA AACGAAGGAA TTGAAGAATG TGCAAAACTA
GTTCAAAAAT TATTAAAAAA ATCTGGTGTA AAATCTGAAA TTTTGAGATT GAAAAAAGGA
GTTGCTCCTA TTGTGTATGG AGAAGTAAAA TCAAAACAAA ACCCAAACAA GACTCTGATG
TTTTACAATC ATTATGACGT TCAACCTGCA GAACCCTTTG ATTTGTGGGA TTCTCCACCA
TTTAGTGGAA CTAGAAAGGG AAACAAAATC TTTGGACGCG GTGCCACTGA TGACAAAGGT
GAACTAATTA CCCGAATCAA AGCAGTTGAT GCTTGTCTAA AAGCAACTGG TGATGTTCCA
TGTAACATAA AATTTGTAAT TGAAGGTGAA GAGGAAACTG GTAGTGCGAA CATTGAAGAC
TATCTAAAAA AATACAAAAA GAAATTTTCC TGTGATGGTG TTATCTGGGA GTTTGGTTAT
GTTGATGCAA AAAATCGGCC TATCATTGGA CTTGGAATGA AAGGATTGCT TTTTGTTGAA
TTGTCTGTTA AAGAGTCTAC TCGAGATGCT CACTCTAGTT TAGCAGTATT GATCAAAAAC
CCTGCTTGGA GATTAATTGA AGCAGTTCAT TCTCTACGTG ACTCTAATGG AAAAATTCTG
ATTAAAGATT GGTACAAAGA GGTAACTCCA CTATCAAAAC AAGATTTGAA ATTGATTCAA
AGTGAACCAT TTGATGAAAA TGATTTCAAA AAAGAATTTG GCATCAAATC TTTTGTTGGA
AACAAAAAAG GACTTGATGC AAAAAAGGCT CTAGTTGGAG GGGCTACTTG TAATATTGCA
GGATTTGTGT CTGGCTATAC GGGAGATGGA GCTAAAACTG TACTTCCCTC AGAATCTCTT
GTAAAAATTG ATTTTAGATT GGTTCCTAAA ATGGACCCAA AAAAACAAGT TATGCGTTTG
AAAAGACACC TAAAATCAAA AGGATTCTCT GATATTGGCA TCAAAGTTTT TCATGGTGAA
GCCGCCGCTA GAACAAATTC TTCAAATCCA TTTGTTTCTC AAGTAAAAGA TGCAGCTGAC
AAATCCTTTG GAACATCAAT TCTCAATGTT TCTAATGCTG GTACTGGTCC AATGTATCCA
TTTGTAGAAA TTCTAAAAGC CCCCTGTATT GCAATTGGAA GCACCTACAT GTTCTCAAGA
ATTCACTCTC CAAATGAATT TGCACGTGTT GATTTGCTCA AGAAAATGAC AAAATGTGCA
TGTCTAATAA TGGATAATTT TGGAAAATCC TAG
|
|---|
| Protein sequence | MNPLKHVDDH MEDLISDLQT LIRQPSVSAK NEGIEECAKL VQKLLKKSGV KSEILRLKKG
VAPIVYGEVK SKQNPNKTLM FYNHYDVQPA EPFDLWDSPP FSGTRKGNKI FGRGATDDKG
ELITRIKAVD ACLKATGDVP CNIKFVIEGE EETGSANIED YLKKYKKKFS CDGVIWEFGY
VDAKNRPIIG LGMKGLLFVE LSVKESTRDA HSSLAVLIKN PAWRLIEAVH SLRDSNGKIL
IKDWYKEVTP LSKQDLKLIQ SEPFDENDFK KEFGIKSFVG NKKGLDAKKA LVGGATCNIA
GFVSGYTGDG AKTVLPSESL VKIDFRLVPK MDPKKQVMRL KRHLKSKGFS DIGIKVFHGE
AAARTNSSNP FVSQVKDAAD KSFGTSILNV SNAGTGPMYP FVEILKAPCI AIGSTYMFSR
IHSPNEFARV DLLKKMTKCA CLIMDNFGKS
|
|---|
| |