| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0690 |
|---|
| Symbol | |
|---|
| ID | 5774609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 631181 |
|---|
| End bp | 632062 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641316326 |
|---|
| Product | tRNA methyltransferase complex GCD14 subunit |
|---|
| Protein accession | YP_001582024 |
|---|
| Protein GI | 161528198 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TTAAGCAAAA TTCTCCTGTT CTGTTCTACT TTAATCATTC AAAAAAATGG
CTCGTTAAAA TATCAAAAAA AGACTCCCTT CATACACATA TTGGAGTTAT CAAACACTCT
GATGCTATTG GAAAAGAATA TGGTTCTAGA TTAATCACAA ACAAGGACAA GTATGTCTAT
CTTCTCAAAC CAACAATGTA TGACTATGTA ATGAAAATCC AACATGGAAC TCAGATAGTC
TATCCAAAAG ATATTGGTTA CATTATTGCA AGAGCTGGAA TAGAGAGCGG TCAAAAAATT
TTAGAAATCG GAACAGGTAG TGGCTCACTT ACATCTTGTG TTGCAAGTAT TGTAAAACCA
CGTGGACATG TCTACACATT TGATGTTGAT GAAAATTTCA TGAAGATTGC AGAGAAAAAT
ATCGAAAAAG CTGGAGTTTC AAAATATGTA ACACAACACA ATCAAGATTT GAAAACTGCA
AAGAAGATGC CTCTCAAAGA CATGGATGTT GCACTAATTG ATCTTGGTGA TCCATGGATA
GTGATTCCTC AAGTTCGAGA GATGCTAAAG GGCAGCGGTT CTATTTTTGC AATCTGCCCT
ACAATGAACC AATTGGAGAA ATTGACTATG ACTCTAGTTG AAAATGAATT CACTGATATT
GAATCAACTG AACATATTTT GAGAACCATC GAAGCCCGTG AAGGAAAAAC AAGACATTCA
TTTCAAGGCA TAGGTCATAC AACCTATCTC TGCTTTGCAA GAAAGGCATT TTTTGGCAGA
GATGCAAAGA AATCTTCTTC AAAAACTAGC AAGCCTACTT CTAAAACAAG CAAAAAGACT
GTCAAAAAAG CCGCCAAGAA AACAAGCAAG AAAACATCCT AA
|
|---|
| Protein sequence | MDKIKQNSPV LFYFNHSKKW LVKISKKDSL HTHIGVIKHS DAIGKEYGSR LITNKDKYVY
LLKPTMYDYV MKIQHGTQIV YPKDIGYIIA RAGIESGQKI LEIGTGSGSL TSCVASIVKP
RGHVYTFDVD ENFMKIAEKN IEKAGVSKYV TQHNQDLKTA KKMPLKDMDV ALIDLGDPWI
VIPQVREMLK GSGSIFAICP TMNQLEKLTM TLVENEFTDI ESTEHILRTI EAREGKTRHS
FQGIGHTTYL CFARKAFFGR DAKKSSSKTS KPTSKTSKKT VKKAAKKTSK KTS
|
|---|
| |