Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0653 |
Symbol | |
ID | 5774463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 592793 |
End bp | 593812 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641316289 |
Product | hypothetical protein |
Protein accession | YP_001581987 |
Protein GI | 161528161 |
COG category | [S] Function unknown |
COG ID | [COG4301] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03438] probable methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.671427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAATA CCTTACAAAA AAACAAAGAA TACAAGAAAT TTGTTGTTGA TTCCAGATTA CAATATTTCA AACCTCATGC CACAAAAATT GAAAAAACGT TTGCTGAAGA AATCTCATCT GGCCTTGGAA CTAACTCTAA ATCTATTCAT CCCAAATTTT TCTATGACAA GAAAGGTTCT GAGTTGTTTG AAAAAATATG TTCTGTTCCA GAATACTATC CTACTAGAAC TGAAATTTCT ATTCTGAAAA AACTCCAGAG TGAACTGTCT TCCTACTTGG ATGAAGACTT TAGATTGGTA GAATTAGGCA GTGGTTCCTC AACAAAAACT CGGTTAATCC TGGACTTTTT GACATCTCAA AAAACTCTCG AGTACTTTCC AATAGATATC TCTGAAATTC TTACAGAAAG TTCTGAAGAA TTACTAAATG ATTATCAAAA TCTTACAATT ACTGGCATTA TCGATACTTA TGAGGGTGGT TTAGAATTTT TAAAAACATA TGATGATAAA AGCAATCTCA TCATTTTCCT GGGTTCCAGT TTTGGTAATT TCTCTCCAAT TGACGGGTAC AAATTTTTAG AAAAAGTTTA TGCTACTATG AAACCTGGTG ATTTGTTTTT GATTGGACTT GATCTTGTAA AAGACAAAAC CATTCTTGAA TCTGCTTATA ATGACTCTGA AGGCGTAACT GCAAAGTTCA ATCTTAATGT TTTATCTAGA ATTAATGACG AGCTTGATGC TGATTTTAAT TTACAAAACT TTTCACATCA TGCTATTTAC AATGAAAAAG ATCAGAGAAT TGAAATGTAT TTGAAATCTC TGGTTGATCA ATCAATAATC ATATCAAAAT CTGATTTGGA ATTAAAATTA CAAAAAGATG AATTGATTCA CACTGAATAC TCTCACAAAT ATAGATTATC TCAAATTCAT GATCTTCTTG ATGATGTTGG ATTTGAGTTA AAACACACCT GGCTTGACGA TAAAAAATAT TTTTCATTAA CTTTGGTCTC AAAAACTTGA
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Protein sequence | MNNTLQKNKE YKKFVVDSRL QYFKPHATKI EKTFAEEISS GLGTNSKSIH PKFFYDKKGS ELFEKICSVP EYYPTRTEIS ILKKLQSELS SYLDEDFRLV ELGSGSSTKT RLILDFLTSQ KTLEYFPIDI SEILTESSEE LLNDYQNLTI TGIIDTYEGG LEFLKTYDDK SNLIIFLGSS FGNFSPIDGY KFLEKVYATM KPGDLFLIGL DLVKDKTILE SAYNDSEGVT AKFNLNVLSR INDELDADFN LQNFSHHAIY NEKDQRIEMY LKSLVDQSII ISKSDLELKL QKDELIHTEY SHKYRLSQIH DLLDDVGFEL KHTWLDDKKY FSLTLVSKT
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