Gene Nmar_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0647 
Symbol 
ID5773833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp584407 
End bp585120 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content33% 
IMG OID641316283 
Producthypothetical protein 
Protein accessionYP_001581981 
Protein GI161528155 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.941733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCAA AAATAAGAAT TAAAGAATTC AAACCACTTA ATCTAGAAGG AGGATATCTT 
ATTGACGGAT TTCCATCAGC AGGTTTTAGC AGTGCAATTG CATCAGAATC AATGGTGCAC
ACATCGAAAT TTAAACTAGC AGGAATTATT GACTCAGACA TATTTCCACC AATTAGTGTA
ATTAAAGATG GAAAACCAAA CTACCCATCA AGAATTTTTG TAAATGAAGA ATCAAAGGTA
AGTGTCTTTT TATCATATCT AACACTTGAT CAATCATTAC ACAAAGTTAC AGCCAAAACA
ATGCTTAATT GGGCACAAAA ACACAAAATT GGATTAGTTG TAAGCAGTAT TGCAGTAAAA
TCACCTAATG AAAATGAAGA GTTGATTGGA ATTGGCAGTA CAGATTCTGC ACGAGAAAAA
ATAAGAAGTG CAGGGTTAAA AGTTTTAGAA TTTGGAACAG TACCAGGAAT TCCTGGAACG
TTGTTAAATG TAGCAAGCAT AACAGGACAA GATGTAATTG TAATTATTTT TCATACAAAT
GGGGAAGGTC CTGATTTTAA ATCAAGTGCT AAGTTATGTA TGGCAATATC GAAGTTAATT
CCAGGATCAT CATGTGATAT TTCTGCATTA CAAAAAGAAG CAGAAAAAGC TGAAACAGTT
ATCAAAGAAG CTGAAGAAGA ATCTAAGCAT CTAAAAGATT CTATGTACAT GTAA
 
Protein sequence
MYPKIRIKEF KPLNLEGGYL IDGFPSAGFS SAIASESMVH TSKFKLAGII DSDIFPPISV 
IKDGKPNYPS RIFVNEESKV SVFLSYLTLD QSLHKVTAKT MLNWAQKHKI GLVVSSIAVK
SPNENEELIG IGSTDSAREK IRSAGLKVLE FGTVPGIPGT LLNVASITGQ DVIVIIFHTN
GEGPDFKSSA KLCMAISKLI PGSSCDISAL QKEAEKAETV IKEAEEESKH LKDSMYM