Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0624 |
Symbol | |
ID | 5774011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 564972 |
End bp | 565880 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641316259 |
Product | transcription factor TFIIB cyclin-related protein |
Protein accession | YP_001581958 |
Protein GI | 161528132 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTAAAG GAGAAAATCA AAAATACAAA TGTCCAAGGT GTGGAAAAGG CACACTAGTT ACTGATCCAA ACACTGGAGA GAATTTTTGC GGAGCATGTG GATTTGTAAT TACTGAAAAA GTTGAAGAGT CAGGTCCGGA ATGGAGATCC TTTTCAAATG AAGGTGAAAA CAAAAGCAGA GCAGGAGTTC CAACATCACT TGCAATGCAC GATATGGGAT TAGCTACTGT AATCAATCCT CAAAACAGAG ATGCAACTGG AAAACCATTA ACAGCTTCAA TGAAAAGTAC TATTGAGAGA TTAAGAACTT GGGATAGTAG AAGTCAAGTT CATGAACCAG TTGACAGAAA CTTTAGACAA GCATTTAGTG AATTAGATAG ACTCAAAGAC AAATTAGCAG TAGGTGATGC AGTTATTGAA AAAGCAGCTT ACATTTACAG AAAAGCATTA GAGAAAGGAC TAGTTAGAGG ACGTTCCATT TCAGCTTTAA TTGCATCAGC ACTTTATGCT GCATGTCGAG ACACTGAAAC CCCAAGAACA CTAAAAGATA TTGGACAAGC AAGTAACATC AAAAGAAAAG ACATTGCAAG ATGTTATAGA TTATTGTTAA GAGAATTAAA TTTGAAGATG CCAGTAGTAG ACCCAATCAA ATGTATTTCA AGAATTGCAA GCAAAGCTGG TTTATCAGAG AAAACAAAAA GAAAAGCAAC AAAGATTTTG CAAACTGCAG AAGAAAATAA AATTTCAGCA GGTAAAGACC CAATGGGATT AGCAGCTGCT GCACTCTATG TTGCATGTGT AACAAATGGA GAAAATAAAA CACAGCGAGA TGTAGCAGAA GCTGCAGGAG TCACTGAAGT GACCATCAGA AACAGGTACA AAGGCCTAAA AGTAGCATTA AACCTCTAG
|
Protein sequence | MVKGENQKYK CPRCGKGTLV TDPNTGENFC GACGFVITEK VEESGPEWRS FSNEGENKSR AGVPTSLAMH DMGLATVINP QNRDATGKPL TASMKSTIER LRTWDSRSQV HEPVDRNFRQ AFSELDRLKD KLAVGDAVIE KAAYIYRKAL EKGLVRGRSI SALIASALYA ACRDTETPRT LKDIGQASNI KRKDIARCYR LLLRELNLKM PVVDPIKCIS RIASKAGLSE KTKRKATKIL QTAEENKISA GKDPMGLAAA ALYVACVTNG ENKTQRDVAE AAGVTEVTIR NRYKGLKVAL NL
|
| |