Gene Nmar_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0617 
Symbol 
ID5774300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp557641 
End bp558132 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content29% 
IMG OID641316252 
Producthypothetical protein 
Protein accessionYP_001581951 
Protein GI161528125 
COG category[S] Function unknown 
COG ID[COG2042] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC AAGTTTTGAT GTTTTATCAA GATGATCCAA AAAAATGCAC AGCTGCAAAA 
ATGGTAAAGT TTGGTCTTGC TCAAAGTATT AAAAAAATCG GAACTAAAGG ATTAGTTTTA
GATCCTTTCT CAAAAAATAC TCTTATGTCT AAAGACAAAT CACTAATCAA CTCTATTGTT
GGAATTGATT GCTCTTGGAA TCTAGCTGAT CAAGCATTTT CAAAAAAATT TAATGGAATA
AAACGAAAAC TTCCACCATT ACTTGCAGGA AATCCTGTAA ATTATGCAAA ATTAAACAAA
TTAACCACTG TTGAAGCATT GGCTGCATCA TTATTCATCT TGGGACAAAA AGAACAAGGT
TTAGAACTAC TTGAAAAATT CAAGTGGGGA CATACTTTCT ATGAATTAAA TCAAAATTTA
TTTGATGAAT ATTTGAAATT AGAAAACGAA GAACAAATTG AATTAATTCT TAAAGATTAT
GGTTTACTCT GA
 
Protein sequence
MKLQVLMFYQ DDPKKCTAAK MVKFGLAQSI KKIGTKGLVL DPFSKNTLMS KDKSLINSIV 
GIDCSWNLAD QAFSKKFNGI KRKLPPLLAG NPVNYAKLNK LTTVEALAAS LFILGQKEQG
LELLEKFKWG HTFYELNQNL FDEYLKLENE EQIELILKDY GLL