| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0609 |
|---|
| Symbol | |
|---|
| ID | 5773419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 547547 |
|---|
| End bp | 548086 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641316244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001581943 |
|---|
| Protein GI | 161528117 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGTA AGATTCGATA TGGAAAAAAA TCCATTGGTT ATTCTATAGT TAAAAGTACG
AGAAGAAAGA CTTCGGAGAT TCAAGTTGAT GAGAAAAAAA TAGTGTTGCG TGTTCCTAGT
ACCAAAACAA AAGACGAGAT TAGAAATATC ATGGAAGAAA AAAAACAATG GATCTTCAAA
AGGCAACTGG AATTTGCTGA CCATGAGAAA AGAAGACTCT CTACAAAACA AAAAACTCCT
TTGTATATGC AAAAAAGAAC ATGGAAATTA GCCTCAAAAA TAGGTGTAAA ACCCTCAAAA
GTGGTAGTAA AAAACCTGAA ATCCAGATGG GGAAGTGCTG GGAAAAATGG AACCATTACT
TTGAATCGGG CGTTAACAAA AACTCCTCCT AGAATTATTG ACTATGTGAT CATTCATGAA
TTATGTCATT TGAAAATTCA AAATCATTCA AAGGCTTTCT GGAATTTGCT CTGTAGGTTT
GACAAAAACT ATGAATCAAA AATCAATTGG CTTGAGACCC ACTCAAACCA GATCTTGTGA
|
|---|
| Protein sequence | MNGKIRYGKK SIGYSIVKST RRKTSEIQVD EKKIVLRVPS TKTKDEIRNI MEEKKQWIFK
RQLEFADHEK RRLSTKQKTP LYMQKRTWKL ASKIGVKPSK VVVKNLKSRW GSAGKNGTIT
LNRALTKTPP RIIDYVIIHE LCHLKIQNHS KAFWNLLCRF DKNYESKINW LETHSNQIL
|
|---|
| |